/* * This file is part of bzkf-rwdp-check * * Copyright (C) 2024 Comprehensive Cancer Center Mainfranken and contributors. * * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 2 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License along * with this program; if not, write to the Free Software Foundation, Inc., * 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. */ SELECT CASE WHEN condcodingcode LIKE 'C00%' OR condcodingcode LIKE 'C01%' OR condcodingcode LIKE 'C02%' OR condcodingcode LIKE 'C03%' OR condcodingcode LIKE 'C04%' OR condcodingcode LIKE 'C05%' OR condcodingcode LIKE 'C06%' OR condcodingcode LIKE 'C07%' OR condcodingcode LIKE 'C08%' OR condcodingcode LIKE 'C09%' OR condcodingcode LIKE 'C10%' OR condcodingcode LIKE 'C11%' OR condcodingcode LIKE 'C12%' OR condcodingcode LIKE 'C13%' OR condcodingcode LIKE 'C14%' THEN 'C00-C14' WHEN condcodingcode LIKE 'C15%' THEN 'C15' WHEN condcodingcode LIKE 'C16%' THEN 'C16' WHEN condcodingcode LIKE 'C18%' OR condcodingcode LIKE 'C19%' OR condcodingcode LIKE 'C20%' OR condcodingcode LIKE 'C21%' THEN 'C18-C21' WHEN condcodingcode LIKE 'C22%' THEN 'C22' WHEN condcodingcode LIKE 'C23%' OR condcodingcode LIKE 'C24%' THEN 'C23-C24' WHEN condcodingcode LIKE 'C25%' THEN 'C25' WHEN condcodingcode LIKE 'C32%' THEN 'C32' WHEN condcodingcode LIKE 'C33%' OR condcodingcode LIKE 'C34%' THEN 'C33-C34' WHEN condcodingcode LIKE 'C43%' THEN 'C43' WHEN condcodingcode LIKE 'C50%' OR condcodingcode LIKE 'D05%' THEN 'C50, D05' WHEN condcodingcode LIKE 'C53%' OR condcodingcode LIKE 'D06%' THEN 'C53, D06' WHEN condcodingcode LIKE 'C54%' OR condcodingcode LIKE 'C55%' THEN 'C54-C55' WHEN condcodingcode LIKE 'C56%' OR condcodingcode = 'D39.1' THEN 'C56, D39.1' WHEN condcodingcode LIKE 'C61%' THEN 'C61' WHEN condcodingcode LIKE 'C62%' THEN 'C62' WHEN condcodingcode LIKE 'C64%' THEN 'C64' WHEN condcodingcode LIKE 'C67%' OR condcodingcode = 'D09.0' OR condcodingcode = 'D41.4' THEN 'C67, D09.0, D41.4' WHEN condcodingcode LIKE 'C70%' OR condcodingcode LIKE 'C71%' OR condcodingcode LIKE 'C72%' THEN 'C70-C72' WHEN condcodingcode LIKE 'C73%' THEN 'C73' WHEN condcodingcode LIKE 'C81%' THEN 'C81' WHEN condcodingcode LIKE 'C82%' OR condcodingcode LIKE 'C83%' OR condcodingcode LIKE 'C84%' OR condcodingcode LIKE 'C85%' OR condcodingcode LIKE 'C86%' OR condcodingcode LIKE 'C87%' OR condcodingcode LIKE 'C88%' OR condcodingcode LIKE 'C96%' THEN 'C82-C88, C96' WHEN condcodingcode LIKE 'C90%' THEN 'C90' WHEN condcodingcode LIKE 'C91%' OR condcodingcode LIKE 'C92%' OR condcodingcode LIKE 'C93%' OR condcodingcode LIKE 'C94%' OR condcodingcode LIKE 'C95%' THEN 'C91-C95' ELSE 'Other' END AS ICD10_GROUP, COUNT(*) as COUNT FROM ( SELECT DISTINCT EXTRACTVALUE(lme.xml_daten, '//Patienten_Stammdaten/@Patient_ID') AS pid, lme.versionsnummer, SHA2(CONCAT('https://fhir.diz.uk-erlangen.de/identifiers/onkostar-xml-condition-id|', EXTRACTVALUE(lme.xml_daten, '//Patienten_Stammdaten/@Patient_ID'), 'condition', EXTRACTVALUE(lme.xml_daten, '//Diagnose/@Tumor_ID')), 256) AS cond_id, SUBSTRING_INDEX(EXTRACTVALUE(lm.xml_daten, '//Primaertumor_ICD_Code'), ' ', 1) AS condcodingcode, SUBSTRING_INDEX(SUBSTRING_INDEX(EXTRACTVALUE(lm.xml_daten, '//Diagnosedatum'), ' ', 1), '.', -1) AS diagnosejahr FROM lkr_meldung_export lme JOIN lkr_meldung lm ON (lm.id = lme.lkr_meldung AND lme.typ <> '-1' AND lm.extern <= :include_extern) WHERE lme.xml_daten LIKE '%ICD_Version%' AND SUBSTRING_INDEX(SUBSTRING_INDEX(EXTRACTVALUE(lm.xml_daten, '//Diagnosedatum'), ' ', 1), '.', -1) = :year AND (lm.xml_daten LIKE '%%' OR lm.xml_daten LIKE '%%') AND (lm.xml_daten NOT LIKE '%histologie_zytologie%' OR 1 = :include_histo_zyto) ) o1 LEFT OUTER JOIN ( SELECT DISTINCT SHA2(CONCAT('https://fhir.diz.uk-erlangen.de/identifiers/onkostar-xml-condition-id|', EXTRACTVALUE(lme.xml_daten, '//Patienten_Stammdaten/@Patient_ID'), 'condition', EXTRACTVALUE(lme.xml_daten, '//Diagnose/@Tumor_ID')), 256) AS cond_id, CASE WHEN le.exportiert_am < :ignore_exports_since THEN MAX(versionsnummer) ELSE ~0 END AS max_version FROM lkr_meldung_export lme JOIN lkr_export le ON (lme.lkr_export = le.id) WHERE SUBSTRING_INDEX(SUBSTRING_INDEX(EXTRACTVALUE(lme.xml_daten, '//Diagnosedatum'), ' ', 1), '.', -1) = :year GROUP BY cond_id ORDER BY cond_id ) o2 ON (o1.cond_id = o2.cond_id AND o1.versionsnummer < max_version) WHERE diagnosejahr = :year AND o2.cond_id IS NULL GROUP BY ICD10_GROUP;