1
0
mirror of https://github.com/pcvolkmer/etl-processor.git synced 2025-07-02 22:42:55 +00:00

fix: handle null values in MtbFile

This should not occur but if, it should not result in NPE except for

* Patient
* Consent
* Episode
This commit is contained in:
2024-05-06 10:43:03 +02:00
parent 26b2f65e67
commit 107429fda7
2 changed files with 84 additions and 23 deletions

View File

@ -134,4 +134,65 @@ class ExtensionsTest {
.isEqualTo("TESTDOMAIN44e20a53bbbf9f3ae39626d05df7014dcd77d6098")
}
@Test
fun shouldNotThrowExceptionOnNullValues(@Mock pseudonymizeService: PseudonymizeService) {
doAnswer {
it.arguments[0]
"PSEUDO-ID"
}.whenever(pseudonymizeService).patientPseudonym(ArgumentMatchers.anyString())
doAnswer {
"TESTDOMAIN"
}.whenever(pseudonymizeService).prefix()
val mtbFile = MtbFile.builder()
.withPatient(
Patient.builder()
.withId("1")
.withBirthDate("2000-08-08")
.withGender(Patient.Gender.MALE)
.build()
)
.withConsent(
Consent.builder()
.withId("1")
.withStatus(Consent.Status.ACTIVE)
.withPatient("123")
.build()
)
.withEpisode(
Episode.builder()
.withId("1")
.withPatient("1")
.withPeriod(PeriodStart("2023-08-08"))
.build()
)
.withClaims(null)
.withDiagnoses(null)
.withCarePlans(null)
.withClaimResponses(null)
.withEcogStatus(null)
.withFamilyMemberDiagnoses(null)
.withGeneticCounsellingRequests(null)
.withHistologyReevaluationRequests(null)
.withHistologyReports(null)
.withLastGuidelineTherapies(null)
.withMolecularPathologyFindings(null)
.withMolecularTherapies(null)
.withNgsReports(null)
.withPreviousGuidelineTherapies(null)
.withRebiopsyRequests(null)
.withRecommendations(null)
.withResponses(null)
.withStudyInclusionRequests(null)
.withSpecimens(null)
.build()
mtbFile.pseudonymizeWith(pseudonymizeService)
mtbFile.anonymizeContentWith(pseudonymizeService)
assertThat(mtbFile.episode.id).isNotNull()
}
}