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chore: data model changes (#117)

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See: 3234082af1
This commit is contained in:
Paul-Christian Volkmer
2025-06-26 01:08:30 +02:00
committed by GitHub
parent 17f4dc3512
commit 858189aa59
3 changed files with 1390 additions and 1367 deletions
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1
src/main/kotlin/dev/dnpm/etl/processor/pseudonym/extensions.kt
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@ -255,6 +255,7 @@ infix fun Mtb.pseudonymizeWith(pseudonymizeService: PseudonymizeService) {
this.claims?.forEach { it.patient.id = patientPseudonym }
this.claimResponses?.forEach { it.patient.id = patientPseudonym }
this.diagnoses?.forEach { it.patient.id = patientPseudonym }
this.familyMemberHistories?.forEach { it.patient.id = patientPseudonym }
this.histologyReports?.forEach {
it.patient.id = patientPseudonym
it.results.tumorMorphology?.patient?.id = patientPseudonym

2
src/test/kotlin/dev/dnpm/etl/processor/pseudonym/ExtensionsTest.kt
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@ -207,7 +207,7 @@ class ExtensionsTest {
inner class UsingDnpmV2Datamodel {
val FAKE_MTB_FILE_PATH = "mv64e-mtb-fake-patient.json"
val CLEAN_PATIENT_ID = "e14bf9b6-7982-4933-a648-cfdea6484f1c"
val CLEAN_PATIENT_ID = "aca5a971-28be-4089-8128-0036a4fe6f1a"
private fun fakeMtbFile(): Mtb {
val mtbFile = ClassPathResource(FAKE_MTB_FILE_PATH).inputStream

2754
src/test/resources/mv64e-mtb-fake-patient.json
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