pcvolkmer/etl-processor
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Merge branch 'master' into add-docker-build

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# Conflicts:
#	README.md
#	build.gradle.kts
This commit is contained in:
Jakub Lidke
2023-08-25 12:59:38 +02:00
parent bbea48322f 9921e1e684
commit da26b5a2c8
40 changed files with 2753 additions and 277 deletions
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55
build.gradle.kts
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@ -1,4 +1,6 @@
import org.gradle.api.tasks.testing.logging.TestLogEvent
import org.jetbrains.kotlin.gradle.tasks.KotlinCompile
import org.springframework.boot.gradle.tasks.bundling.BootBuildImage
plugins {
id("org.springframework.boot") version "3.1.1"
@ -8,12 +10,31 @@ plugins {
}
group = "de.ukw.ccc"
version = "0.1.0-SNAPSHOT"
version = "0.2.0-SNAPSHOT"
var versions = mapOf(
"bwhc-dto-java" to "0.2.0",
"hapi-fhir" to "6.6.2",
"httpclient5" to "5.2.1",
"mockito-kotlin" to "5.1.0"
)
java {
sourceCompatibility = JavaVersion.VERSION_17
}
sourceSets {
create("integrationTest") {
compileClasspath += sourceSets.main.get().output
runtimeClasspath += sourceSets.main.get().output
}
}
val integrationTestImplementation: Configuration by configurations.getting {
extendsFrom(configurations.testImplementation.get())
extendsFrom(configurations.runtimeOnly.get())
}
configurations {
compileOnly {
extendsFrom(configurations.annotationProcessor.get())
@ -41,10 +62,10 @@ dependencies {
implementation("org.flywaydb:flyway-mysql")
implementation("commons-codec:commons-codec")
implementation("io.projectreactor.kotlin:reactor-kotlin-extensions")
implementation("de.ukw.ccc:bwhc-dto-java:0.2.0")
implementation("ca.uhn.hapi.fhir:hapi-fhir-base:6.6.2")
implementation("ca.uhn.hapi.fhir:hapi-fhir-structures-r4:6.6.2")
implementation("org.apache.httpcomponents.client5:httpclient5:5.2.1")
implementation("de.ukw.ccc:bwhc-dto-java:${versions["bwhc-dto-java"]}")
implementation("ca.uhn.hapi.fhir:hapi-fhir-base:${versions["hapi-fhir"]}")
implementation("ca.uhn.hapi.fhir:hapi-fhir-structures-r4:${versions["hapi-fhir"]}")
implementation("org.apache.httpcomponents.client5:httpclient5:${versions["httpclient5"]}")
runtimeOnly("org.mariadb.jdbc:mariadb-java-client")
runtimeOnly("org.postgresql:postgresql")
developmentOnly("org.springframework.boot:spring-boot-devtools")
@ -52,6 +73,9 @@ dependencies {
annotationProcessor("org.springframework.boot:spring-boot-configuration-processor")
testImplementation("org.springframework.boot:spring-boot-starter-test")
testImplementation("io.projectreactor:reactor-test")
testImplementation("org.mockito.kotlin:mockito-kotlin:${versions["mockito-kotlin"]}")
integrationTestImplementation("org.testcontainers:junit-jupiter")
integrationTestImplementation("org.testcontainers:postgresql")
}
tasks.withType<KotlinCompile> {
@ -63,5 +87,26 @@ tasks.withType<KotlinCompile> {
tasks.withType<Test> {
useJUnitPlatform()
testLogging {
events(TestLogEvent.FAILED, TestLogEvent.PASSED, TestLogEvent.SKIPPED)
}
}
task<Test>("integrationTest") {
description = "Runs integration tests"
testClassesDirs = sourceSets["integrationTest"].output.classesDirs
classpath = sourceSets["integrationTest"].runtimeClasspath
shouldRunAfter("test")
}
tasks.named<BootBuildImage>("bootBuildImage") {
imageName.set("ghcr.io/ccc-mf/etl-processor")
environment.set(environment.get() + mapOf(
"BP_OCI_SOURCE" to "https://github.com/CCC-MF/etl-processor",
"BP_OCI_LICENSES" to "AGPLv3",
"BP_OCI_DESCRIPTION" to "ETL Processor for bwHC MTB files"
))
}