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mv64e-mtb-dto-go/mtb.go

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package mtb
import (
"bytes"
"encoding/json"
)
func UnmarshalMtb(data []byte) (Mtb, error) {
var r Mtb
dec := json.NewDecoder(bytes.NewReader(data))
dec.DisallowUnknownFields()
err := dec.Decode(&r)
return r, err
}
func (r *Mtb) Marshal() ([]byte, error) {
return json.Marshal(r)
}
type Mtb struct {
CarePlans []MtbCarePlan `json:"carePlans,omitempty"`
ClaimResponses []ClaimResponse `json:"claimResponses,omitempty"`
Claims []Claim `json:"claims,omitempty"`
Diagnoses []MtbDiagnosis `json:"diagnoses"`
EpisodesOfCare []MtbEpisodeOfCare `json:"episodesOfCare"`
FamilyMemberHistories []FamilyMemberHistory `json:"familyMemberHistories,omitempty"`
FollowUPS []FollowUp `json:"followUps,omitempty"`
GuidelineProcedures []OncoProcedure `json:"guidelineProcedures,omitempty"`
GuidelineTherapies []MtbSystemicTherapy `json:"guidelineTherapies,omitempty"`
HistologyReports []HistologyReport `json:"histologyReports,omitempty"`
IhcReports []IhcReport `json:"ihcReports,omitempty"`
Metadata *MvhMetadata `json:"metadata,omitempty"`
NgsReports []SomaticNgsReport `json:"ngsReports,omitempty"`
Patient Patient `json:"patient"`
PerformanceStatus []PerformanceStatus `json:"performanceStatus,omitempty"`
PriorDiagnosticReports []PriorDiagnosticReport `json:"priorDiagnosticReports,omitempty"`
Responses []Response `json:"responses,omitempty"`
Specimens []TumorSpecimen `json:"specimens,omitempty"`
SystemicTherapies []SystemicTherapy `json:"systemicTherapies,omitempty"`
}
type MtbCarePlan struct {
GeneticCounselingRecommendation *GeneticCounselingRecommendation `json:"geneticCounselingRecommendation,omitempty"`
HistologyReevaluationRequests []HistologyReevaluationRequest `json:"histologyReevaluationRequests,omitempty"`
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
MedicationRecommendations []MtbMedicationRecommendation `json:"medicationRecommendations,omitempty"`
NoSequencingPerformedReason *CarePlanNoSequencingPerformedReasonCoding `json:"noSequencingPerformedReason,omitempty"`
Notes []string `json:"notes,omitempty"`
Patient Reference `json:"patient"`
ProcedureRecommendations []ProcedureRecommendation `json:"procedureRecommendations,omitempty"`
Reason *Reference `json:"reason,omitempty"`
RebiopsyRequests []RebiopsyRequest `json:"rebiopsyRequests,omitempty"`
RecommendationsMissingReason *MtbCarePlanRecommendationsMissingReasonCoding `json:"recommendationsMissingReason,omitempty"`
StudyEnrollmentRecommendations []MtbStudyEnrollmentRecommendation `json:"studyEnrollmentRecommendations,omitempty"`
}
type GeneticCounselingRecommendation struct {
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
Patient Reference `json:"patient"`
Reason GeneticCounselingRecommendationReasonCoding `json:"reason"`
}
type Reference struct {
Display *string `json:"display,omitempty"`
ID string `json:"id"`
System *string `json:"system,omitempty"`
Type *string `json:"type,omitempty"`
}
type GeneticCounselingRecommendationReasonCoding struct {
Code GeneticCounselingRecommendationReasonCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type HistologyReevaluationRequest struct {
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
Patient Reference `json:"patient"`
Specimen Reference `json:"specimen"`
}
type MtbMedicationRecommendation struct {
Category *MtbMedicationRecommendationCategoryCoding `json:"category,omitempty"`
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
LevelOfEvidence *LevelOfEvidence `json:"levelOfEvidence,omitempty"`
Medication []AtcUnregisteredMedicationCoding `json:"medication"`
Patient Reference `json:"patient"`
Priority RecommendationPriorityCoding `json:"priority"`
Reason *Reference `json:"reason,omitempty"`
SupportingVariants []GeneAlterationReference `json:"supportingVariants,omitempty"`
UseType *MtbMedicationRecommendationUseTypeCoding `json:"useType,omitempty"`
}
type MtbMedicationRecommendationCategoryCoding struct {
Code MtbMedicationRecommendationCategoryCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type LevelOfEvidence struct {
Addendums []LevelOfEvidenceAddendumCoding `json:"addendums,omitempty"`
Grading LevelOfEvidenceGradingCoding `json:"grading"`
Publications []PublicationReference `json:"publications,omitempty"`
}
type LevelOfEvidenceAddendumCoding struct {
Code LevelOfEvidenceAddendumCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type LevelOfEvidenceGradingCoding struct {
Code LevelOfEvidenceGradingCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type PublicationReference struct {
Display *string `json:"display,omitempty"`
ID string `json:"id"`
System PublicationSystem `json:"system"`
Type *string `json:"type,omitempty"`
}
type AtcUnregisteredMedicationCoding struct {
Code string `json:"code"`
Display *string `json:"display,omitempty"`
System RequestedMedicationSystem `json:"system"`
Version *string `json:"version,omitempty"`
}
type RecommendationPriorityCoding struct {
Code RecommendationPriorityCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type GeneAlterationReference struct {
Display *string `json:"display,omitempty"`
Gene *Coding `json:"gene,omitempty"`
Variant Reference `json:"variant"`
}
type Coding struct {
Code string `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type MtbMedicationRecommendationUseTypeCoding struct {
Code MtbMedicationRecommendationUseTypeCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type CarePlanNoSequencingPerformedReasonCoding struct {
Code NoSequencingPerformedReasonCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type ProcedureRecommendation struct {
Code MtbProcedureRecommendationCategoryCoding `json:"code"`
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
LevelOfEvidence *LevelOfEvidence `json:"levelOfEvidence,omitempty"`
Patient Reference `json:"patient"`
Priority RecommendationPriorityCoding `json:"priority"`
Reason *Reference `json:"reason,omitempty"`
SupportingVariants []GeneAlterationReference `json:"supportingVariants,omitempty"`
}
type MtbProcedureRecommendationCategoryCoding struct {
Code MtbProcedureRecommendationCategoryCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type RebiopsyRequest struct {
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
Patient Reference `json:"patient"`
TumorEntity Reference `json:"tumorEntity"`
}
type MtbCarePlanRecommendationsMissingReasonCoding struct {
Code MtbCarePlanRecommendationsMissingReasonCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type MtbStudyEnrollmentRecommendation struct {
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
LevelOfEvidence *LevelOfEvidence `json:"levelOfEvidence,omitempty"`
Medication []AtcUnregisteredMedicationCoding `json:"medication,omitempty"`
Patient Reference `json:"patient"`
Priority RecommendationPriorityCoding `json:"priority"`
Reason Reference `json:"reason"`
Study []StudyReference `json:"study"`
SupportingVariants []GeneAlterationReference `json:"supportingVariants,omitempty"`
}
type StudyReference struct {
Display *string `json:"display,omitempty"`
ID string `json:"id"`
System StudySystem `json:"system"`
Type *string `json:"type,omitempty"`
}
type ClaimResponse struct {
Claim Reference `json:"claim"`
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
Patient Reference `json:"patient"`
Status *ClaimResponseStatusCoding `json:"status,omitempty"`
StatusReason []ClaimResponseStatusReasonCoding `json:"statusReason,omitempty"`
}
type ClaimResponseStatusCoding struct {
Code ClaimResponseStatusCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type ClaimResponseStatusReasonCoding struct {
Code ClaimResponseStatusReasonCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type Claim struct {
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
Patient Reference `json:"patient"`
Recommendation Reference `json:"recommendation"`
RequestedMedication []AtcUnregisteredMedicationCoding `json:"requestedMedication,omitempty"`
Stage *ClaimStageCoding `json:"stage,omitempty"`
}
type ClaimStageCoding struct {
Code ClaimStageCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type MtbDiagnosis struct {
Code Coding `json:"code"`
GermlineCodes []Coding `json:"germlineCodes,omitempty"`
Grading *Grading `json:"grading,omitempty"`
GuidelineTreatmentStatus *MtbDiagnosisGuidelineTreatmentStatusCoding `json:"guidelineTreatmentStatus,omitempty"`
Histology []Reference `json:"histology,omitempty"`
ID string `json:"id"`
Notes []string `json:"notes,omitempty"`
Patient Reference `json:"patient"`
RecordedOn string `json:"recordedOn"`
Staging *Staging `json:"staging,omitempty"`
Topography Coding `json:"topography"`
Type Type `json:"type"`
}
type Grading struct {
History []TumorGrading `json:"history"`
}
type TumorGrading struct {
Codes []Coding `json:"codes"`
Date string `json:"date"`
}
type MtbDiagnosisGuidelineTreatmentStatusCoding struct {
Code MtbDiagnosisGuidelineTreatmentStatusCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type Staging struct {
History []TumorStaging `json:"history"`
}
type TumorStaging struct {
Date string `json:"date"`
Method TumorStagingMethodCoding `json:"method"`
OtherClassifications []Coding `json:"otherClassifications,omitempty"`
TnmClassification *TnmClassification `json:"tnmClassification,omitempty"`
}
type TumorStagingMethodCoding struct {
Code TumorStagingMethodCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type TnmClassification struct {
Metastasis Coding `json:"metastasis"`
Nodes Coding `json:"nodes"`
Tumor Coding `json:"tumor"`
}
type Type struct {
History []History `json:"history"`
}
type History struct {
Date string `json:"date"`
Value MtbDiagnosisCoding `json:"value"`
}
type MtbDiagnosisCoding struct {
Code ValueCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type MtbEpisodeOfCare struct {
Diagnoses []Reference `json:"diagnoses,omitempty"`
ID string `json:"id"`
Patient Reference `json:"patient"`
Period PeriodDate `json:"period"`
}
type PeriodDate struct {
End *string `json:"end,omitempty"`
Start string `json:"start"`
}
type FamilyMemberHistory struct {
ID string `json:"id"`
Patient Reference `json:"patient"`
Relationship FamilyMemberHistoryRelationshipTypeCoding `json:"relationship"`
}
type FamilyMemberHistoryRelationshipTypeCoding struct {
Code FamilyMemberHistoryRelationshipTypeCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type FollowUp struct {
Date string `json:"date"`
LastContactDate *string `json:"lastContactDate,omitempty"`
Patient Reference `json:"patient"`
PatientStatus *FollowUpPatientStatusCoding `json:"patientStatus,omitempty"`
}
type FollowUpPatientStatusCoding struct {
Code FollowUpPatientStatusCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type OncoProcedure struct {
BasedOn *Reference `json:"basedOn,omitempty"`
Code OncoProcedureCoding `json:"code"`
ID string `json:"id"`
Intent *MtbTherapyIntentCoding `json:"intent,omitempty"`
Notes []string `json:"notes,omitempty"`
Patient Reference `json:"patient"`
Period *PeriodDate `json:"period,omitempty"`
Reason *Reference `json:"reason,omitempty"`
RecordedOn string `json:"recordedOn"`
Status TherapyStatusCoding `json:"status"`
StatusReason *MtbTherapyStatusReasonCoding `json:"statusReason,omitempty"`
TherapyLine *int64 `json:"therapyLine,omitempty"`
}
type OncoProcedureCoding struct {
Code OncoProcedureCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type MtbTherapyIntentCoding struct {
Code MtbTherapyIntentCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type TherapyStatusCoding struct {
Code TherapyStatusCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type MtbTherapyStatusReasonCoding struct {
Code MtbTherapyStatusReasonCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type MtbSystemicTherapy struct {
BasedOn *Reference `json:"basedOn,omitempty"`
Category *MtbSystemicTherapyCategoryCoding `json:"category,omitempty"`
Dosage *MtbSystemicTherapyDosageDensityCoding `json:"dosage,omitempty"`
ID string `json:"id"`
Intent *MtbTherapyIntentCoding `json:"intent,omitempty"`
Medication []AtcUnregisteredMedicationCoding `json:"medication,omitempty"`
Notes []string `json:"notes,omitempty"`
Patient Reference `json:"patient"`
Period *PeriodDate `json:"period,omitempty"`
Reason *Reference `json:"reason,omitempty"`
RecommendationFulfillmentStatus *MtbSystemicTherapyRecommendationFulfillmentStatusCoding `json:"recommendationFulfillmentStatus,omitempty"`
RecordedOn string `json:"recordedOn"`
Status TherapyStatusCoding `json:"status"`
StatusReason *MtbTherapyStatusReasonCoding `json:"statusReason,omitempty"`
TherapyLine *int64 `json:"therapyLine,omitempty"`
}
type MtbSystemicTherapyCategoryCoding struct {
Code MtbSystemicTherapyCategoryCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type MtbSystemicTherapyDosageDensityCoding struct {
Code MtbSystemicTherapyDosageDensityCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type MtbSystemicTherapyRecommendationFulfillmentStatusCoding struct {
Code MtbSystemicTherapyRecommendationFulfillmentStatusCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type HistologyReport struct {
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
Patient Reference `json:"patient"`
Results HistologyReportResults `json:"results"`
Specimen Reference `json:"specimen"`
}
type HistologyReportResults struct {
TumorCellContent *TumorCellContent `json:"tumorCellContent,omitempty"`
TumorMorphology TumorMorphology `json:"tumorMorphology"`
}
type TumorCellContent struct {
ID string `json:"id"`
Method TumorCellContentMethodCoding `json:"method"`
Patient Reference `json:"patient"`
Specimen Reference `json:"specimen"`
Value float64 `json:"value"`
}
type TumorCellContentMethodCoding struct {
Code TumorCellContentMethodCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type TumorMorphology struct {
ID string `json:"id"`
Note *string `json:"note,omitempty"`
Patient Reference `json:"patient"`
Specimen Reference `json:"specimen"`
Value Coding `json:"value"`
}
type IhcReport struct {
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
Patient Reference `json:"patient"`
Results IhcReportResults `json:"results"`
Specimen Reference `json:"specimen"`
}
type IhcReportResults struct {
MSIMmr []MSIMmr `json:"msiMmr"`
ProteinExpression []ProteinExpression `json:"proteinExpression"`
}
type MSIMmr struct {
ICScore *ProteinExpressionICScoreCoding `json:"icScore,omitempty"`
ID string `json:"id"`
Patient Reference `json:"patient"`
Protein Coding `json:"protein"`
TcScore *ProteinExpressionTcScoreCoding `json:"tcScore,omitempty"`
TpsScore *int64 `json:"tpsScore,omitempty"`
Value ProteinExpressionResultCoding `json:"value"`
}
type ProteinExpressionICScoreCoding struct {
Code ProteinExpressionICScoreCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type ProteinExpressionTcScoreCoding struct {
Code ProteinExpressionTcScoreCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type ProteinExpressionResultCoding struct {
Code ProteinExpressionResultCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type ProteinExpression struct {
ICScore *ProteinExpressionICScoreCoding `json:"icScore,omitempty"`
ID string `json:"id"`
Patient Reference `json:"patient"`
Protein Coding `json:"protein"`
TcScore *ProteinExpressionTcScoreCoding `json:"tcScore,omitempty"`
TpsScore *int64 `json:"tpsScore,omitempty"`
Value ProteinExpressionResultCoding `json:"value"`
}
type MvhMetadata struct {
ModelProjectConsent ModelProjectConsent `json:"modelProjectConsent"`
ResearchConsents []map[string]interface{} `json:"researchConsents,omitempty"`
TransferTAN string `json:"transferTAN"`
Type MvhSubmissionType `json:"type"`
}
type ModelProjectConsent struct {
Date *string `json:"date,omitempty"`
Provisions []Provision `json:"provisions"`
Version string `json:"version"`
}
type Provision struct {
Date string `json:"date"`
Purpose ModelProjectConsentPurpose `json:"purpose"`
Type ConsentProvision `json:"type"`
}
type SomaticNgsReport struct {
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
Metadata []NgsReportMetadata `json:"metadata"`
Patient Reference `json:"patient"`
Results NgsReportResults `json:"results"`
Specimen Reference `json:"specimen"`
Type NgsReportCoding `json:"type"`
}
type NgsReportMetadata struct {
KitManufacturer string `json:"kitManufacturer"`
KitType string `json:"kitType"`
Pipeline string `json:"pipeline"`
ReferenceGenome string `json:"referenceGenome"`
Sequencer string `json:"sequencer"`
}
type NgsReportResults struct {
Brcaness *Brcaness `json:"brcaness,omitempty"`
CopyNumberVariants []Cnv `json:"copyNumberVariants,omitempty"`
DnaFusions []DnaFusion `json:"dnaFusions,omitempty"`
HrdScore *HrdScore `json:"hrdScore,omitempty"`
RnaFusions []RnaFusion `json:"rnaFusions,omitempty"`
RnaSeqs []RnaSeq `json:"rnaSeqs,omitempty"`
SimpleVariants []Snv `json:"simpleVariants,omitempty"`
Tmb *Tmb `json:"tmb,omitempty"`
TumorCellContent *TumorCellContent `json:"tumorCellContent,omitempty"`
}
type Brcaness struct {
ConfidenceRange ConfidenceRange `json:"confidenceRange"`
ID string `json:"id"`
Patient Reference `json:"patient"`
Specimen Reference `json:"specimen"`
Value float64 `json:"value"`
}
type ConfidenceRange struct {
Max float64 `json:"max"`
Min float64 `json:"min"`
}
type Cnv struct {
CNA *float64 `json:"cnA,omitempty"`
CNB *float64 `json:"cnB,omitempty"`
Chromosome Chromosome `json:"chromosome"`
CopyNumberNeutralLoH []Coding `json:"copyNumberNeutralLoH,omitempty"`
EndRange *EndRange `json:"endRange,omitempty"`
ExternalIDS []VariantExternalID `json:"externalIds,omitempty"`
ID string `json:"id"`
Localization []BaseVariantLocalizationCoding `json:"localization,omitempty"`
Patient Reference `json:"patient"`
RelativeCopyNumber *float64 `json:"relativeCopyNumber,omitempty"`
ReportedAffectedGenes []Coding `json:"reportedAffectedGenes,omitempty"`
ReportedFocality *string `json:"reportedFocality,omitempty"`
StartRange *StartRange `json:"startRange,omitempty"`
TotalCopyNumber *int64 `json:"totalCopyNumber,omitempty"`
Type CnvCoding `json:"type"`
}
type EndRange struct {
End *float64 `json:"end,omitempty"`
Start float64 `json:"start"`
}
type VariantExternalID struct {
System ExternalIDSystem `json:"system"`
Value string `json:"value"`
}
type BaseVariantLocalizationCoding struct {
Code BaseVariantLocalizationCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type StartRange struct {
End *float64 `json:"end,omitempty"`
Start float64 `json:"start"`
}
type CnvCoding struct {
Code CnvCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type DnaFusion struct {
ExternalIDS []VariantExternalID `json:"externalIds,omitempty"`
FusionPartner3Prime DnaFusionFusionPartner3Prime `json:"fusionPartner3prime"`
FusionPartner5Prime DnaFusionFusionPartner5Prime `json:"fusionPartner5prime"`
ID string `json:"id"`
Localization []BaseVariantLocalizationCoding `json:"localization,omitempty"`
Patient Reference `json:"patient"`
ReportedNumReads int64 `json:"reportedNumReads"`
}
type DnaFusionFusionPartner3Prime struct {
Chromosome Chromosome `json:"chromosome"`
Gene Coding `json:"gene"`
Position float64 `json:"position"`
}
type DnaFusionFusionPartner5Prime struct {
Chromosome Chromosome `json:"chromosome"`
Gene Coding `json:"gene"`
Position float64 `json:"position"`
}
type HrdScore struct {
Components Components `json:"components"`
ID string `json:"id"`
Interpretation *HrdScoreInterpretationCoding `json:"interpretation,omitempty"`
Patient Reference `json:"patient"`
Specimen Reference `json:"specimen"`
Value float64 `json:"value"`
}
type Components struct {
Loh float64 `json:"loh"`
Lst float64 `json:"lst"`
Tai float64 `json:"tai"`
}
type HrdScoreInterpretationCoding struct {
Code InterpretationCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type RnaFusion struct {
Effect *string `json:"effect,omitempty"`
ExternalIDS []VariantExternalID `json:"externalIds,omitempty"`
FusionPartner3Prime RnaFusionFusionPartner3Prime `json:"fusionPartner3prime"`
FusionPartner5Prime RnaFusionFusionPartner5Prime `json:"fusionPartner5prime"`
ID string `json:"id"`
Localization []BaseVariantLocalizationCoding `json:"localization,omitempty"`
Patient Reference `json:"patient"`
ReportedNumReads int64 `json:"reportedNumReads"`
}
type RnaFusionFusionPartner3Prime struct {
ExonID string `json:"exonId"`
Gene Coding `json:"gene"`
Position float64 `json:"position"`
Strand StrandEnum `json:"strand"`
TranscriptID TranscriptID `json:"transcriptId"`
}
type TranscriptID struct {
System TranscriptIDSystem `json:"system"`
Value string `json:"value"`
}
type RnaFusionFusionPartner5Prime struct {
ExonID string `json:"exonId"`
Gene Coding `json:"gene"`
Position float64 `json:"position"`
Strand StrandEnum `json:"strand"`
TranscriptID TranscriptID `json:"transcriptId"`
}
type RnaSeq struct {
CohortRanking *int64 `json:"cohortRanking,omitempty"`
ExternalIDS []VariantExternalID `json:"externalIds,omitempty"`
Gene *Coding `json:"gene,omitempty"`
ID string `json:"id"`
LibrarySize *int64 `json:"librarySize,omitempty"`
Localization []BaseVariantLocalizationCoding `json:"localization,omitempty"`
Patient Reference `json:"patient"`
RawCounts int64 `json:"rawCounts"`
TissueCorrectedExpression *bool `json:"tissueCorrectedExpression,omitempty"`
TranscriptID *TranscriptID `json:"transcriptId,omitempty"`
TranscriptsPerMillion float64 `json:"transcriptsPerMillion"`
Variant Reference `json:"variant"`
}
type Snv struct {
AllelicFrequency float64 `json:"allelicFrequency"`
AltAllele string `json:"altAllele"`
Chromosome Chromosome `json:"chromosome"`
DnaChange string `json:"dnaChange"`
ExonID *string `json:"exonId,omitempty"`
ExternalIDS []VariantExternalID `json:"externalIds,omitempty"`
Gene Coding `json:"gene"`
ID string `json:"id"`
Interpretation *ClinVarCoding `json:"interpretation,omitempty"`
Localization []BaseVariantLocalizationCoding `json:"localization,omitempty"`
Patient Reference `json:"patient"`
Position Position `json:"position"`
ProteinChange *string `json:"proteinChange,omitempty"`
ReadDepth int64 `json:"readDepth"`
RefAllele string `json:"refAllele"`
TranscriptID TranscriptID `json:"transcriptId"`
}
type ClinVarCoding struct {
Code ClinVarCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type Position struct {
End *float64 `json:"end,omitempty"`
Start float64 `json:"start"`
}
type Tmb struct {
ID string `json:"id"`
Interpretation *TmbInterpretationCoding `json:"interpretation,omitempty"`
Patient Reference `json:"patient"`
Specimen Reference `json:"specimen"`
Value TmbResult `json:"value"`
}
type TmbInterpretationCoding struct {
Code InterpretationCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type TmbResult struct {
Unit *string `json:"unit,omitempty"`
Value float64 `json:"value"`
}
type NgsReportCoding struct {
Code NgsReportCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type Patient struct {
Address Address `json:"address"`
Age *Age `json:"age,omitempty"`
BirthDate string `json:"birthDate"`
DateOfDeath *string `json:"dateOfDeath,omitempty"`
Gender GenderCoding `json:"gender"`
HealthInsurance HealthInsurance `json:"healthInsurance"`
ID string `json:"id"`
ManagingSite *Coding `json:"managingSite,omitempty"`
VitalStatus *VitalStatusCoding `json:"vitalStatus,omitempty"`
}
type Address struct {
MunicipalityCode string `json:"municipalityCode"`
}
type Age struct {
Unit Unit `json:"unit"`
Value float64 `json:"value"`
}
type GenderCoding struct {
Code GenderCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type HealthInsurance struct {
Reference *Reference `json:"reference,omitempty"`
Type HealthInsuranceCoding `json:"type"`
}
type HealthInsuranceCoding struct {
Code HealthInsuranceCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type VitalStatusCoding struct {
Code VitalStatusCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type PerformanceStatus struct {
EffectiveDate string `json:"effectiveDate"`
ID string `json:"id"`
Patient Reference `json:"patient"`
Value EcogCoding `json:"value"`
}
type EcogCoding struct {
Code EcogCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type PriorDiagnosticReport struct {
ID string `json:"id"`
IssuedOn string `json:"issuedOn"`
Patient Reference `json:"patient"`
Performer *Reference `json:"performer,omitempty"`
Results []string `json:"results,omitempty"`
Specimen Reference `json:"specimen"`
Type MolecularDiagnosticReportCoding `json:"type"`
}
type MolecularDiagnosticReportCoding struct {
Code MolecularDiagnosticReportCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type Response struct {
EffectiveDate string `json:"effectiveDate"`
ID string `json:"id"`
Method ResponseMethodCoding `json:"method"`
Patient Reference `json:"patient"`
Therapy Reference `json:"therapy"`
Value RecistCoding `json:"value"`
}
type ResponseMethodCoding struct {
Code ResponseMethodCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type RecistCoding struct {
Code RecistCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type TumorSpecimen struct {
Collection *Collection `json:"collection,omitempty"`
Diagnosis Reference `json:"diagnosis"`
ID string `json:"id"`
Patient Reference `json:"patient"`
Type TumorSpecimenCoding `json:"type"`
}
type Collection struct {
Date *string `json:"date,omitempty"`
Localization TumorSpecimenCollectionLocalizationCoding `json:"localization"`
Method TumorSpecimenCollectionMethodCoding `json:"method"`
}
type TumorSpecimenCollectionLocalizationCoding struct {
Code TumorSpecimenCollectionLocalizationCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type TumorSpecimenCollectionMethodCoding struct {
Code TumorSpecimenCollectionMethodCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type TumorSpecimenCoding struct {
Code TumorSpecimenCodingCode `json:"code"`
Display *string `json:"display,omitempty"`
System *string `json:"system,omitempty"`
Version *string `json:"version,omitempty"`
}
type SystemicTherapy struct {
History []MtbSystemicTherapy `json:"history"`
}
type GeneticCounselingRecommendationReasonCodingCode string
const (
FamilyAnamnesis GeneticCounselingRecommendationReasonCodingCode = "family-anamnesis"
GeneticCounselingRecommendationReasonCodingCodeOther GeneticCounselingRecommendationReasonCodingCode = "other"
GeneticCounselingRecommendationReasonCodingCodeUnknown GeneticCounselingRecommendationReasonCodingCode = "unknown"
SecondaryTumor GeneticCounselingRecommendationReasonCodingCode = "secondary-tumor"
SelfAnamnesis GeneticCounselingRecommendationReasonCodingCode = "self-anamnesis"
)
type MtbMedicationRecommendationCategoryCodingCode string
const (
MtbMedicationRecommendationCategoryCodingCodeCh MtbMedicationRecommendationCategoryCodingCode = "CH"
MtbMedicationRecommendationCategoryCodingCodeHo MtbMedicationRecommendationCategoryCodingCode = "HO"
MtbMedicationRecommendationCategoryCodingCodeIm MtbMedicationRecommendationCategoryCodingCode = "IM"
MtbMedicationRecommendationCategoryCodingCodeSO MtbMedicationRecommendationCategoryCodingCode = "SO"
MtbMedicationRecommendationCategoryCodingCodeSz MtbMedicationRecommendationCategoryCodingCode = "SZ"
MtbMedicationRecommendationCategoryCodingCodeZs MtbMedicationRecommendationCategoryCodingCode = "ZS"
)
type LevelOfEvidenceAddendumCodingCode string
const (
Is LevelOfEvidenceAddendumCodingCode = "is"
Iv LevelOfEvidenceAddendumCodingCode = "iv"
R LevelOfEvidenceAddendumCodingCode = "R"
Z LevelOfEvidenceAddendumCodingCode = "Z"
)
type LevelOfEvidenceGradingCodingCode string
const (
LevelOfEvidenceGradingCodingCodeUndefined LevelOfEvidenceGradingCodingCode = "undefined"
LevelOfEvidenceGradingCodingCodeM1A LevelOfEvidenceGradingCodingCode = "m1A"
LevelOfEvidenceGradingCodingCodeM1B LevelOfEvidenceGradingCodingCode = "m1B"
LevelOfEvidenceGradingCodingCodeM1C LevelOfEvidenceGradingCodingCode = "m1C"
LevelOfEvidenceGradingCodingCodeM2A LevelOfEvidenceGradingCodingCode = "m2A"
LevelOfEvidenceGradingCodingCodeM2B LevelOfEvidenceGradingCodingCode = "m2B"
LevelOfEvidenceGradingCodingCodeM2C LevelOfEvidenceGradingCodingCode = "m2C"
LevelOfEvidenceGradingCodingCodeM3 LevelOfEvidenceGradingCodingCode = "m3"
LevelOfEvidenceGradingCodingCodeM4 LevelOfEvidenceGradingCodingCode = "m4"
)
type PublicationSystem string
const (
PubmedNcbiNlmNihGov PublicationSystem = "https://pubmed.ncbi.nlm.nih.gov"
DoiOrg PublicationSystem = "https://www.doi.org"
)
type RequestedMedicationSystem string
const (
FhirDeCodeSystemBfarmAtc RequestedMedicationSystem = "http://fhir.de/CodeSystem/bfarm/atc"
SystemUndefined RequestedMedicationSystem = "undefined"
)
type RecommendationPriorityCodingCode string
const (
RecommendationPriorityCodingCode1 RecommendationPriorityCodingCode = "1"
RecommendationPriorityCodingCode2 RecommendationPriorityCodingCode = "2"
RecommendationPriorityCodingCode3 RecommendationPriorityCodingCode = "3"
RecommendationPriorityCodingCode4 RecommendationPriorityCodingCode = "4"
)
type MtbMedicationRecommendationUseTypeCodingCode string
const (
MtbMedicationRecommendationUseTypeCodingCodeCompassionate MtbMedicationRecommendationUseTypeCodingCode = "compassionate"
MtbMedicationRecommendationUseTypeCodingCodeInLabel MtbMedicationRecommendationUseTypeCodingCode = "in-label"
MtbMedicationRecommendationUseTypeCodingCodeUnknown MtbMedicationRecommendationUseTypeCodingCode = "unknown"
MtbMedicationRecommendationUseTypeCodingCodeOffLabel MtbMedicationRecommendationUseTypeCodingCode = "off-label"
MtbMedicationRecommendationUseTypeCodingCodeSECPreventive MtbMedicationRecommendationUseTypeCodingCode = "sec-preventive"
)
type NoSequencingPerformedReasonCode string
const (
MtbDiagnosisCodingCodeOther NoSequencingPerformedReasonCode = "other"
NonGeneticCause NoSequencingPerformedReasonCode = "non-genetic-cause"
NotRareDisease NoSequencingPerformedReasonCode = "not-rare-disease"
Psychosomatic NoSequencingPerformedReasonCode = "psychosomatic"
TargetedDiagnosticsRecommended NoSequencingPerformedReasonCode = "targeted-diagnostics-recommended"
)
type MtbProcedureRecommendationCategoryCodingCode string
const (
MtbProcedureRecommendationCategoryCodingCodeAs MtbProcedureRecommendationCategoryCodingCode = "AS"
MtbProcedureRecommendationCategoryCodingCodeSO MtbProcedureRecommendationCategoryCodingCode = "SO"
MtbProcedureRecommendationCategoryCodingCodeOp MtbProcedureRecommendationCategoryCodingCode = "OP"
MtbProcedureRecommendationCategoryCodingCodeSt MtbProcedureRecommendationCategoryCodingCode = "ST"
MtbProcedureRecommendationCategoryCodingCodeWs MtbProcedureRecommendationCategoryCodingCode = "WS"
MtbProcedureRecommendationCategoryCodingCodeWw MtbProcedureRecommendationCategoryCodingCode = "WW"
)
type MtbCarePlanRecommendationsMissingReasonCodingCode string
const (
NoTarget MtbCarePlanRecommendationsMissingReasonCodingCode = "no-target"
)
type StudySystem string
const (
Drks StudySystem = "DRKS"
Eudamed StudySystem = "EUDAMED"
EudraCT StudySystem = "Eudra-CT"
Nct StudySystem = "NCT"
)
type ClaimResponseStatusCodingCode string
const (
Accepted ClaimResponseStatusCodingCode = "accepted"
ClaimResponseStatusCodingCodeUnknown ClaimResponseStatusCodingCode = "unknown"
Rejected ClaimResponseStatusCodingCode = "rejected"
)
type ClaimResponseStatusReasonCodingCode string
const (
ClaimResponseStatusReasonCodingCodeApprovalRevocation ClaimResponseStatusReasonCodingCode = "approval-revocation"
ClaimResponseStatusReasonCodingCodeOther ClaimResponseStatusReasonCodingCode = "other"
ClaimResponseStatusReasonCodingCodeUnknown ClaimResponseStatusReasonCodingCode = "unknown"
ClaimResponseStatusReasonCodingCodeFormalReasons ClaimResponseStatusReasonCodingCode = "formal-reasons"
ClaimResponseStatusReasonCodingCodeInclusionInStudy ClaimResponseStatusReasonCodingCode = "inclusion-in-study"
ClaimResponseStatusReasonCodingCodeInsufficientEvidence ClaimResponseStatusReasonCodingCode = "insufficient-evidence"
ClaimResponseStatusReasonCodingCodeOtherTherapyRecommended ClaimResponseStatusReasonCodingCode = "other-therapy-recommended"
ClaimResponseStatusReasonCodingCodeStandardTherapyNotExhausted ClaimResponseStatusReasonCodingCode = "standard-therapy-not-exhausted"
)
type ClaimStageCodingCode string
const (
ClaimStageCodingCodeUnknown ClaimStageCodingCode = "unknown"
ClaimStageCodingCodeFollowUpClaim ClaimStageCodingCode = "follow-up-claim"
ClaimStageCodingCodeInitialClaim ClaimStageCodingCode = "initial-claim"
ClaimStageCodingCodeRevocation ClaimStageCodingCode = "revocation"
)
type MtbDiagnosisGuidelineTreatmentStatusCodingCode string
const (
MtbDiagnosisGuidelineTreatmentStatusCodingCodeExhausted MtbDiagnosisGuidelineTreatmentStatusCodingCode = "exhausted"
MtbDiagnosisGuidelineTreatmentStatusCodingCodeImpossible MtbDiagnosisGuidelineTreatmentStatusCodingCode = "impossible"
MtbDiagnosisGuidelineTreatmentStatusCodingCodeUnknown MtbDiagnosisGuidelineTreatmentStatusCodingCode = "unknown"
MtbDiagnosisGuidelineTreatmentStatusCodingCodeNoGuidelinesAvailable MtbDiagnosisGuidelineTreatmentStatusCodingCode = "no-guidelines-available"
MtbDiagnosisGuidelineTreatmentStatusCodingCodeNonExhausted MtbDiagnosisGuidelineTreatmentStatusCodingCode = "non-exhausted"
)
type TumorStagingMethodCodingCode string
const (
Clinical TumorStagingMethodCodingCode = "clinical"
Pathologic TumorStagingMethodCodingCode = "pathologic"
)
type ValueCode string
const (
Main ValueCode = "main"
Metachronous ValueCode = "metachronous"
Secondary ValueCode = "secondary"
)
type FamilyMemberHistoryRelationshipTypeCodingCode string
const (
EXT FamilyMemberHistoryRelationshipTypeCodingCode = "EXT"
Fammemb FamilyMemberHistoryRelationshipTypeCodingCode = "FAMMEMB"
)
type FollowUpPatientStatusCodingCode string
const (
FollowUpPatientStatusCodingCodeLostToFu FollowUpPatientStatusCodingCode = "lost-to-fu"
)
type OncoProcedureCodingCode string
const (
NuclearMedicine OncoProcedureCodingCode = "nuclear-medicine"
RadioTherapy OncoProcedureCodingCode = "radio-therapy"
Surgery OncoProcedureCodingCode = "surgery"
)
type MtbTherapyIntentCodingCode string
const (
MtbTherapyIntentCodingCodeK MtbTherapyIntentCodingCode = "K"
MtbTherapyIntentCodingCodeS MtbTherapyIntentCodingCode = "S"
MtbTherapyIntentCodingCodeP MtbTherapyIntentCodingCode = "P"
MtbTherapyIntentCodingCodeX MtbTherapyIntentCodingCode = "X"
)
type TherapyStatusCodingCode string
const (
TherapyStatusCodingCodeCompleted TherapyStatusCodingCode = "completed"
TherapyStatusCodingCodeNotDone TherapyStatusCodingCode = "not-done"
TherapyStatusCodingCodeOnGoing TherapyStatusCodingCode = "on-going"
TherapyStatusCodingCodeStopped TherapyStatusCodingCode = "stopped"
TherapyStatusCodingCodeUnknown TherapyStatusCodingCode = "unknown"
)
type MtbTherapyStatusReasonCodingCode string
const (
MtbTherapyStatusReasonCodingCodeBestSupportiveCare MtbTherapyStatusReasonCodingCode = "best-supportive-care"
MtbTherapyStatusReasonCodingCodeChronicRemission MtbTherapyStatusReasonCodingCode = "chronic-remission"
MtbTherapyStatusReasonCodingCodeDeterioration MtbTherapyStatusReasonCodingCode = "deterioration"
MtbTherapyStatusReasonCodingCodeMedicalReasons MtbTherapyStatusReasonCodingCode = "medical-reasons"
MtbTherapyStatusReasonCodingCodeLostToFu MtbTherapyStatusReasonCodingCode = "lost-to-fu"
MtbTherapyStatusReasonCodingCodeOther MtbTherapyStatusReasonCodingCode = "other"
MtbTherapyStatusReasonCodingCodeNoIndication MtbTherapyStatusReasonCodingCode = "no-indication"
MtbTherapyStatusReasonCodingCodeOtherTherapyChosen MtbTherapyStatusReasonCodingCode = "other-therapy-chosen"
MtbTherapyStatusReasonCodingCodePatientDeath MtbTherapyStatusReasonCodingCode = "patient-death"
MtbTherapyStatusReasonCodingCodePatientRefusal MtbTherapyStatusReasonCodingCode = "patient-refusal"
MtbTherapyStatusReasonCodingCodePatientWish MtbTherapyStatusReasonCodingCode = "patient-wish"
MtbTherapyStatusReasonCodingCodePaymentEnded MtbTherapyStatusReasonCodingCode = "payment-ended"
MtbTherapyStatusReasonCodingCodePaymentPending MtbTherapyStatusReasonCodingCode = "payment-pending"
MtbTherapyStatusReasonCodingCodePaymentRefused MtbTherapyStatusReasonCodingCode = "payment-refused"
MtbTherapyStatusReasonCodingCodeProgression MtbTherapyStatusReasonCodingCode = "progression"
MtbTherapyStatusReasonCodingCodeRegularCompletion MtbTherapyStatusReasonCodingCode = "regular-completion"
MtbTherapyStatusReasonCodingCodeRegularCompletionWithDosageReduction MtbTherapyStatusReasonCodingCode = "regular-completion-with-dosage-reduction"
MtbTherapyStatusReasonCodingCodeRegularCompletionWithSubstanceChange MtbTherapyStatusReasonCodingCode = "regular-completion-with-substance-change"
MtbTherapyStatusReasonCodingCodeToxicity MtbTherapyStatusReasonCodingCode = "toxicity"
)
type MtbSystemicTherapyCategoryCodingCode string
const (
MtbSystemicTherapyCategoryCodingCodeA MtbSystemicTherapyCategoryCodingCode = "A"
MtbSystemicTherapyCategoryCodingCodeI MtbSystemicTherapyCategoryCodingCode = "I"
MtbSystemicTherapyCategoryCodingCodeS MtbSystemicTherapyCategoryCodingCode = "S"
MtbSystemicTherapyCategoryCodingCodeN MtbSystemicTherapyCategoryCodingCode = "N"
MtbSystemicTherapyCategoryCodingCodeO MtbSystemicTherapyCategoryCodingCode = "O"
)
type MtbSystemicTherapyDosageDensityCodingCode string
const (
Over50 MtbSystemicTherapyDosageDensityCodingCode = "over-50%"
Under50 MtbSystemicTherapyDosageDensityCodingCode = "under-50%"
)
type MtbSystemicTherapyRecommendationFulfillmentStatusCodingCode string
const (
Complete MtbSystemicTherapyRecommendationFulfillmentStatusCodingCode = "complete"
Partial MtbSystemicTherapyRecommendationFulfillmentStatusCodingCode = "partial"
)
type TumorCellContentMethodCodingCode string
const (
Bioinformatic TumorCellContentMethodCodingCode = "bioinformatic"
Histologic TumorCellContentMethodCodingCode = "histologic"
)
type ProteinExpressionICScoreCodingCode string
const (
ProteinExpressionICScoreCodingCode0 ProteinExpressionICScoreCodingCode = "0"
ProteinExpressionICScoreCodingCode1 ProteinExpressionICScoreCodingCode = "1"
ProteinExpressionICScoreCodingCode2 ProteinExpressionICScoreCodingCode = "2"
ProteinExpressionICScoreCodingCode3 ProteinExpressionICScoreCodingCode = "3"
)
type ProteinExpressionTcScoreCodingCode string
const (
ProteinExpressionTcScoreCodingCode0 ProteinExpressionTcScoreCodingCode = "0"
ProteinExpressionTcScoreCodingCode1 ProteinExpressionTcScoreCodingCode = "1"
ProteinExpressionTcScoreCodingCode2 ProteinExpressionTcScoreCodingCode = "2"
ProteinExpressionTcScoreCodingCode3 ProteinExpressionTcScoreCodingCode = "3"
ProteinExpressionTcScoreCodingCode4 ProteinExpressionTcScoreCodingCode = "4"
ProteinExpressionTcScoreCodingCode5 ProteinExpressionTcScoreCodingCode = "5"
ProteinExpressionTcScoreCodingCode6 ProteinExpressionTcScoreCodingCode = "6"
)
type ProteinExpressionResultCodingCode string
const (
ProteinExpressionResultCodingCodeExp ProteinExpressionResultCodingCode = "exp"
ProteinExpressionResultCodingCodeNotExp ProteinExpressionResultCodingCode = "not-exp"
ProteinExpressionResultCodingCodeUnknown ProteinExpressionResultCodingCode = "unknown"
ProteinExpressionResultCodingCodeCode1Plus ProteinExpressionResultCodingCode = "1+"
ProteinExpressionResultCodingCodeCode2Plus ProteinExpressionResultCodingCode = "2+"
ProteinExpressionResultCodingCodeCode3Plus ProteinExpressionResultCodingCode = "3+"
)
type ModelProjectConsentPurpose string
const (
CaseIdentification ModelProjectConsentPurpose = "case-identification"
Reidentification ModelProjectConsentPurpose = "reidentification"
Sequencing ModelProjectConsentPurpose = "sequencing"
)
type ConsentProvision string
const (
Deny ConsentProvision = "deny"
Permit ConsentProvision = "permit"
)
type MvhSubmissionType string
const (
Addition MvhSubmissionType = "addition"
Correction MvhSubmissionType = "correction"
Followup MvhSubmissionType = "followup"
Initial MvhSubmissionType = "initial"
)
type Chromosome string
const (
Chr1 Chromosome = "chr1"
Chr10 Chromosome = "chr10"
Chr11 Chromosome = "chr11"
Chr12 Chromosome = "chr12"
Chr13 Chromosome = "chr13"
Chr14 Chromosome = "chr14"
Chr15 Chromosome = "chr15"
Chr16 Chromosome = "chr16"
Chr17 Chromosome = "chr17"
Chr18 Chromosome = "chr18"
Chr19 Chromosome = "chr19"
Chr2 Chromosome = "chr2"
Chr20 Chromosome = "chr20"
Chr21 Chromosome = "chr21"
Chr22 Chromosome = "chr22"
Chr3 Chromosome = "chr3"
Chr4 Chromosome = "chr4"
Chr5 Chromosome = "chr5"
Chr6 Chromosome = "chr6"
Chr7 Chromosome = "chr7"
Chr8 Chromosome = "chr8"
Chr9 Chromosome = "chr9"
ChrX Chromosome = "chrX"
ChrY Chromosome = "chrY"
)
type ExternalIDSystem string
const (
CancerSangerACUkCosmic ExternalIDSystem = "https://cancer.sanger.ac.uk/cosmic"
NcbiNlmNihGovEntrez ExternalIDSystem = "https://www.ncbi.nlm.nih.gov/entrez"
NcbiNlmNihGovSnp ExternalIDSystem = "https://www.ncbi.nlm.nih.gov/snp"
EnsemblOrg ExternalIDSystem = "https://www.ensembl.org"
)
type BaseVariantLocalizationCodingCode string
const (
CodingRegion BaseVariantLocalizationCodingCode = "coding-region"
Intergenic BaseVariantLocalizationCodingCode = "intergenic"
Intronic BaseVariantLocalizationCodingCode = "intronic"
RegulatoryRegion BaseVariantLocalizationCodingCode = "regulatory-region"
SplicingRegion BaseVariantLocalizationCodingCode = "splicing-region"
)
type CnvCodingCode string
const (
HighLevelGain CnvCodingCode = "high-level-gain"
Loss CnvCodingCode = "loss"
LowLevelGain CnvCodingCode = "low-level-gain"
)
type InterpretationCodingCode string
const (
High InterpretationCodingCode = "high"
Intermediate InterpretationCodingCode = "intermediate"
Low InterpretationCodingCode = "low"
)
type StrandEnum string
const (
Empty StrandEnum = "+"
RnaFusionStrand StrandEnum = "-"
)
type TranscriptIDSystem string
const (
FluffyHTTPSWWWEnsemblOrg TranscriptIDSystem = "https://www.ensembl.org"
HTTPSWWWNcbiNlmNihGovRefseq TranscriptIDSystem = "https://www.ncbi.nlm.nih.gov/refseq"
)
type ClinVarCodingCode string
const (
ClinVarCodingCode1 ClinVarCodingCode = "1"
ClinVarCodingCode2 ClinVarCodingCode = "2"
ClinVarCodingCode3 ClinVarCodingCode = "3"
ClinVarCodingCode4 ClinVarCodingCode = "4"
ClinVarCodingCode5 ClinVarCodingCode = "5"
)
type NgsReportCodingCode string
const (
NgsReportCodingCodeArray NgsReportCodingCode = "array"
NgsReportCodingCodeExome NgsReportCodingCode = "exome"
NgsReportCodingCodeGenomeLongRead NgsReportCodingCode = "genome-long-read"
NgsReportCodingCodeGenomeShortRead NgsReportCodingCode = "genome-short-read"
NgsReportCodingCodeKaryotyping NgsReportCodingCode = "karyotyping"
NgsReportCodingCodeOther NgsReportCodingCode = "other"
NgsReportCodingCodePanel NgsReportCodingCode = "panel"
NgsReportCodingCodeSingle NgsReportCodingCode = "single"
)
type Unit string
const (
Months Unit = "Months"
Years Unit = "Years"
)
type GenderCodingCode string
const (
GenderCodingCodeFemale GenderCodingCode = "female"
GenderCodingCodeOther GenderCodingCode = "other"
GenderCodingCodeUnknown GenderCodingCode = "unknown"
GenderCodingCodeMale GenderCodingCode = "male"
)
type HealthInsuranceCodingCode string
const (
Bei HealthInsuranceCodingCode = "BEI"
Bg HealthInsuranceCodingCode = "BG"
Gkv HealthInsuranceCodingCode = "GKV"
Gpv HealthInsuranceCodingCode = "GPV"
Pkv HealthInsuranceCodingCode = "PKV"
Ppv HealthInsuranceCodingCode = "PPV"
Sel HealthInsuranceCodingCode = "SEL"
Skt HealthInsuranceCodingCode = "SKT"
Soz HealthInsuranceCodingCode = "SOZ"
Unk HealthInsuranceCodingCode = "UNK"
)
type VitalStatusCodingCode string
const (
Alive VitalStatusCodingCode = "alive"
Deceased VitalStatusCodingCode = "deceased"
)
type EcogCodingCode string
const (
EcogCodingCode0 EcogCodingCode = "0"
EcogCodingCode1 EcogCodingCode = "1"
EcogCodingCode2 EcogCodingCode = "2"
EcogCodingCode3 EcogCodingCode = "3"
EcogCodingCode4 EcogCodingCode = "4"
EcogCodingCode5 EcogCodingCode = "5"
)
type MolecularDiagnosticReportCodingCode string
const (
MolecularDiagnosticReportCodingCodeFish MolecularDiagnosticReportCodingCode = "FISH"
MolecularDiagnosticReportCodingCodeFusionPanel MolecularDiagnosticReportCodingCode = "fusion-panel"
MolecularDiagnosticReportCodingCodeGenePanel MolecularDiagnosticReportCodingCode = "gene-panel"
MolecularDiagnosticReportCodingCodeArray MolecularDiagnosticReportCodingCode = "array"
MolecularDiagnosticReportCodingCodeExome MolecularDiagnosticReportCodingCode = "exome"
MolecularDiagnosticReportCodingCodeGenomeLongRead MolecularDiagnosticReportCodingCode = "genome-long-read"
MolecularDiagnosticReportCodingCodeGenomeShortRead MolecularDiagnosticReportCodingCode = "genome-short-read"
MolecularDiagnosticReportCodingCodeKaryotyping MolecularDiagnosticReportCodingCode = "karyotyping"
MolecularDiagnosticReportCodingCodeOther MolecularDiagnosticReportCodingCode = "other"
MolecularDiagnosticReportCodingCodePanel MolecularDiagnosticReportCodingCode = "panel"
MolecularDiagnosticReportCodingCodeSingle MolecularDiagnosticReportCodingCode = "single"
MolecularDiagnosticReportCodingCodePcr MolecularDiagnosticReportCodingCode = "PCR"
)
type ResponseMethodCodingCode string
const (
Rano ResponseMethodCodingCode = "RANO"
Recist ResponseMethodCodingCode = "RECIST"
)
type RecistCodingCode string
const (
CR RecistCodingCode = "CR"
Mr RecistCodingCode = "MR"
Na RecistCodingCode = "NA"
PD RecistCodingCode = "PD"
PR RecistCodingCode = "PR"
SD RecistCodingCode = "SD"
)
type TumorSpecimenCollectionLocalizationCodingCode string
const (
TumorSpecimenCollectionLocalizationCodingCodeCellfreeDna TumorSpecimenCollectionLocalizationCodingCode = "cellfree-dna"
TumorSpecimenCollectionLocalizationCodingCodeLocalRecurrence TumorSpecimenCollectionLocalizationCodingCode = "local-recurrence"
TumorSpecimenCollectionLocalizationCodingCodeMetastasis TumorSpecimenCollectionLocalizationCodingCode = "metastasis"
TumorSpecimenCollectionLocalizationCodingCodePrimaryTumor TumorSpecimenCollectionLocalizationCodingCode = "primary-tumor"
TumorSpecimenCollectionLocalizationCodingCodeRegionalLymphNodes TumorSpecimenCollectionLocalizationCodingCode = "regional-lymph-nodes"
TumorSpecimenCollectionLocalizationCodingCodeUnknown TumorSpecimenCollectionLocalizationCodingCode = "unknown"
)
type TumorSpecimenCollectionMethodCodingCode string
const (
TumorSpecimenCollectionMethodCodingCodeBiopsy TumorSpecimenCollectionMethodCodingCode = "biopsy"
TumorSpecimenCollectionMethodCodingCodeCytology TumorSpecimenCollectionMethodCodingCode = "cytology"
TumorSpecimenCollectionMethodCodingCodeResection TumorSpecimenCollectionMethodCodingCode = "resection"
TumorSpecimenCollectionMethodCodingCodeLiquidBiopsy TumorSpecimenCollectionMethodCodingCode = "liquid-biopsy"
TumorSpecimenCollectionMethodCodingCodeUnknown TumorSpecimenCollectionMethodCodingCode = "unknown"
)
type TumorSpecimenCodingCode string
const (
TumorSpecimenCodingCodeCryoFrozen TumorSpecimenCodingCode = "cryo-frozen"
TumorSpecimenCodingCodeFfpe TumorSpecimenCodingCode = "FFPE"
TumorSpecimenCodingCodeFreshTissue TumorSpecimenCodingCode = "fresh-tissue"
TumorSpecimenCodingCodeLiquidBiopsy TumorSpecimenCodingCode = "liquid-biopsy"
TumorSpecimenCodingCodeUnknown TumorSpecimenCodingCode = "unknown"
)
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