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mirror of https://github.com/dnpm-dip/mv64e-mtb-dto-rs.git synced 2025-09-13 02:32:52 +00:00
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mv64e-mtb-dto-rs/tests/mv64e-mtb-fake-patient.json
Paul-Christian Volkmer ffa10084ae chore: update data model
* add submission type 'test'
* make patients address optional
2025-08-19 16:14:48 +02:00

3225 lines
97 KiB
JSON

{
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"gender": {
"code": "female",
"display": "Weiblich",
"system": "Gender"
},
"birthDate": "1983-11-26",
"dateOfDeath": "2010-11-26",
"healthInsurance": {
"type": {
"code": "GKV",
"display": "gesetzliche Krankenversicherung",
"system": "http://fhir.de/CodeSystem/versicherungsart-de-basis"
},
"reference": {
"id": "1234567890",
"system": "https://www.dguv.de/arge-ik",
"display": "AOK",
"type": "HealthInsurance"
}
},
"address": {
"municipalityCode": "12345"
},
"age": {
"value": 27,
"unit": "Years"
},
"vitalStatus": {
"code": "deceased",
"display": "Verstorben",
"system": "dnpm-dip/patient/vital-status"
}
},
"episodesOfCare": [
{
"id": "7b512517-1904-4efa-9b13-4295e84c8ae1",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"period": {
"start": "2025-02-19"
},
"diagnoses": [
{
"id": "ca45ee75-b6fb-4194-acd7-4197c96ba819",
"type": "MTBDiagnosis"
}
]
}
],
"diagnoses": [
{
"id": "ca45ee75-b6fb-4194-acd7-4197c96ba819",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"recordedOn": "2008-04-26",
"type": {
"history": [
{
"value": {
"code": "main",
"display": "Hauptdiagnose",
"system": "dnpm-dip/mtb/diagnosis/type"
},
"date": "2008-04-26"
}
]
},
"code": {
"code": "C24.9",
"display": "Bösartige Neubildung: Gallenwege, nicht näher bezeichnet",
"system": "http://fhir.de/CodeSystem/bfarm/icd-10-gm",
"version": "2025"
},
"topography": {
"code": "C24.9",
"display": "Gallenwege o.n.A.",
"system": "urn:oid:2.16.840.1.113883.6.43.1",
"version": "Zweite Revision"
},
"grading": {
"history": [
{
"date": "2008-04-26",
"codes": [
{
"code": "T",
"display": "T = trifft nicht zu",
"system": "https://www.basisdatensatz.de/feld/161/grading"
},
{
"code": "4",
"display": "Glioblastoma",
"system": "dnpm-dip/mtb/who-grading-cns-tumors",
"version": "2021"
}
]
}
]
},
"staging": {
"history": [
{
"date": "2008-04-26",
"method": {
"code": "clinical",
"display": "Klinisch",
"system": "dnpm-dip/mtb/tumor-staging/method"
},
"tnmClassification": {
"tumor": {
"code": "T2",
"system": "UICC"
},
"nodes": {
"code": "N0",
"system": "UICC"
},
"metastasis": {
"code": "M1",
"system": "UICC"
}
},
"otherClassifications": [
{
"code": "unknown",
"display": "Unbekannt",
"system": "dnpm-dip/mtb/diagnosis/kds-tumor-spread"
}
]
}
]
},
"guidelineTreatmentStatus": {
"code": "impossible",
"display": "Leitlinientherapie nicht möglich",
"system": "dnpm-dip/mtb/diagnosis/guideline-treatment-status"
},
"notes": [
"Notes on the tumor diagnosis..."
]
}
],
"familyMemberHistories": [
{
"id": "82b89124-4e3d-435c-b253-9c0c01771b55",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"relationship": {
"code": "FAMMEMB",
"display": "Verwandter ersten Grades",
"system": "dnpm-dip/mtb/family-meber-history/relationship-type"
}
}
],
"guidelineTherapies": [
{
"id": "53147d60-256e-4ea5-a07e-ea0847963240",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"reason": {
"id": "ca45ee75-b6fb-4194-acd7-4197c96ba819",
"display": "Bösartige Neubildung: Gallenwege, nicht näher bezeichnet",
"type": "MTBDiagnosis"
},
"therapyLine": 5,
"intent": {
"code": "X",
"display": "Keine Angabe",
"system": "dnpm-dip/therapy/intent"
},
"category": {
"code": "S",
"display": "Sonstiges",
"system": "dnpm-dip/therapy/category"
},
"recordedOn": "2025-08-19",
"status": {
"code": "stopped",
"display": "Abgebrochen",
"system": "dnpm-dip/therapy/status"
},
"statusReason": {
"code": "progression",
"display": "Progression",
"system": "dnpm-dip/therapy/status-reason"
},
"period": {
"start": "2023-11-19",
"end": "2024-02-18"
},
"medication": [
{
"code": "L01FX34",
"display": "Odronextamab",
"system": "http://fhir.de/CodeSystem/bfarm/atc",
"version": "2025"
}
],
"notes": [
"Notes on the therapy..."
]
},
{
"id": "e5c57cbc-57e2-4ac6-a28f-c778e7365293",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"reason": {
"id": "ca45ee75-b6fb-4194-acd7-4197c96ba819",
"display": "Bösartige Neubildung: Gallenwege, nicht näher bezeichnet",
"type": "MTBDiagnosis"
},
"therapyLine": 6,
"intent": {
"code": "K",
"display": "Kurativ",
"system": "dnpm-dip/therapy/intent"
},
"category": {
"code": "S",
"display": "Sonstiges",
"system": "dnpm-dip/therapy/category"
},
"recordedOn": "2025-08-19",
"status": {
"code": "stopped",
"display": "Abgebrochen",
"system": "dnpm-dip/therapy/status"
},
"statusReason": {
"code": "progression",
"display": "Progression",
"system": "dnpm-dip/therapy/status-reason"
},
"period": {
"start": "2023-10-19",
"end": "2024-05-09"
},
"medication": [
{
"code": "L01XX58",
"display": "Epacadostat",
"system": "http://fhir.de/CodeSystem/bfarm/atc",
"version": "2025"
}
],
"notes": [
"Notes on the therapy..."
]
}
],
"guidelineProcedures": [
{
"id": "edd079e7-e774-4d73-ae6c-0aa020209de8",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"reason": {
"id": "ca45ee75-b6fb-4194-acd7-4197c96ba819",
"display": "Bösartige Neubildung: Gallenwege, nicht näher bezeichnet",
"type": "MTBDiagnosis"
},
"therapyLine": 7,
"intent": {
"code": "K",
"display": "Kurativ",
"system": "dnpm-dip/therapy/intent"
},
"code": {
"code": "nuclear-medicine",
"display": "Nuklearmedizinische Therapie",
"system": "dnpm-dip/mtb/procedure/type"
},
"status": {
"code": "stopped",
"display": "Abgebrochen",
"system": "dnpm-dip/therapy/status"
},
"statusReason": {
"code": "toxicity",
"display": "Toxizität",
"system": "dnpm-dip/therapy/status-reason"
},
"recordedOn": "2025-08-19",
"period": {
"start": "2025-02-19"
},
"notes": [
"Notes on the therapeutic procedure..."
]
},
{
"id": "28f4c210-4ed0-4d04-b86d-56846a9d7d03",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"reason": {
"id": "ca45ee75-b6fb-4194-acd7-4197c96ba819",
"display": "Bösartige Neubildung: Gallenwege, nicht näher bezeichnet",
"type": "MTBDiagnosis"
},
"therapyLine": 5,
"intent": {
"code": "P",
"display": "Palliativ",
"system": "dnpm-dip/therapy/intent"
},
"code": {
"code": "surgery",
"display": "OP",
"system": "dnpm-dip/mtb/procedure/type"
},
"status": {
"code": "completed",
"display": "Abgeschlossen",
"system": "dnpm-dip/therapy/status"
},
"statusReason": {
"code": "medical-reasons",
"display": "Medizinische Gründe",
"system": "dnpm-dip/therapy/status-reason"
},
"recordedOn": "2025-08-19",
"period": {
"start": "2025-02-19"
},
"notes": [
"Notes on the therapeutic procedure..."
]
}
],
"performanceStatus": [
{
"id": "d16d5132-aaa5-4dfb-8a2a-51502699e427",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"effectiveDate": "2025-08-19",
"value": {
"code": "1",
"display": "ECOG 1",
"system": "ECOG-Performance-Status"
}
}
],
"specimens": [
{
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"diagnosis": {
"id": "ca45ee75-b6fb-4194-acd7-4197c96ba819",
"type": "MTBDiagnosis"
},
"type": {
"code": "FFPE",
"display": "FFPE",
"system": "dnpm-dip/mtb/tumor-specimen/type"
},
"collection": {
"date": "2025-08-19",
"method": {
"code": "cytology",
"display": "Zytologie",
"system": "dnpm-dip/mtb/tumor-specimen/collection/method"
},
"localization": {
"code": "metastasis",
"display": "Metastase",
"system": "dnpm-dip/mtb/tumor-specimen/collection/localization"
}
}
}
],
"priorDiagnosticReports": [
{
"id": "308f6210-bbbb-4803-9412-bc245391879d",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"performer": {
"id": "xyz",
"display": "Molekular-Pathologie UKx",
"type": "Institute"
},
"issuedOn": "2025-08-19",
"specimen": {
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"type": "TumorSpecimen"
},
"type": {
"code": "karyotyping",
"display": "Karyotyping",
"system": "dnpm-dip/mtb/molecular-diagnostics/type"
},
"results": [
"Result of diagnostics..."
]
}
],
"histologyReports": [
{
"id": "de735f37-2c88-451a-a84c-9e7aa330d555",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"specimen": {
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"type": "TumorSpecimen"
},
"issuedOn": "2025-08-19",
"results": {
"tumorMorphology": {
"id": "ff69e7c7-106e-4494-aa8e-f09122d525d1",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"specimen": {
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"type": "TumorSpecimen"
},
"value": {
"code": "9702/1",
"display": "Indolente T-Zell-lymphoproliferative Krankheit des Gastrointestinaltraktes",
"system": "urn:oid:2.16.840.1.113883.6.43.1",
"version": "Zweite Revision"
},
"note": "Notes..."
},
"tumorCellContent": {
"id": "fec1a4d1-0bba-4c7c-8e17-bc59c0de7f12",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"specimen": {
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"type": "TumorSpecimen"
},
"method": {
"code": "histologic",
"display": "Histologisch",
"system": "dnpm-dip/mtb/tumor-cell-content/method"
},
"value": 0.9055861214418794
}
}
}
],
"ihcReports": [
{
"id": "833f35c8-2b3d-44a0-8504-2f8e2070863d",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"specimen": {
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"type": "TumorSpecimen"
},
"issuedOn": "2025-08-19",
"results": {
"proteinExpression": [
{
"id": "6e51d5db-38dd-4498-ad6b-11f1d53ed92c",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"protein": {
"code": "HGNC:6973",
"display": "MDM2",
"system": "https://www.genenames.org/"
},
"value": {
"code": "unknown",
"display": "untersucht, kein Ergebnis",
"system": "dnpm-dip/mtb/ihc/protein-expression/result"
},
"tpsScore": 73,
"icScore": {
"code": "0",
"display": "< 1%",
"system": "dnpm-dip/mtb/ihc/protein-expression/ic-score"
},
"tcScore": {
"code": "6",
"display": ">= 75%",
"system": "dnpm-dip/mtb/ihc/protein-expression/tc-score"
}
},
{
"id": "e9488b58-c5b2-4147-bf07-e94af06355ee",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"protein": {
"code": "HGNC:18615",
"display": "BRAFP1",
"system": "https://www.genenames.org/"
},
"value": {
"code": "3+",
"display": "3+",
"system": "dnpm-dip/mtb/ihc/protein-expression/result"
},
"tpsScore": 79,
"icScore": {
"code": "0",
"display": "< 1%",
"system": "dnpm-dip/mtb/ihc/protein-expression/ic-score"
},
"tcScore": {
"code": "5",
"display": ">= 50%",
"system": "dnpm-dip/mtb/ihc/protein-expression/tc-score"
}
},
{
"id": "c764012e-b2ba-46ac-a3d3-5c523ff2c9ef",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"protein": {
"code": "HGNC:1753",
"display": "CDH13",
"system": "https://www.genenames.org/"
},
"value": {
"code": "not-exp",
"display": "Nicht exprimiert",
"system": "dnpm-dip/mtb/ihc/protein-expression/result"
},
"tpsScore": 97,
"icScore": {
"code": "3",
"display": ">= 10%",
"system": "dnpm-dip/mtb/ihc/protein-expression/ic-score"
},
"tcScore": {
"code": "5",
"display": ">= 50%",
"system": "dnpm-dip/mtb/ihc/protein-expression/tc-score"
}
},
{
"id": "9b95794f-0e00-4da8-8170-7f123977ddb7",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"protein": {
"code": "HGNC:1777",
"display": "CDK6",
"system": "https://www.genenames.org/"
},
"value": {
"code": "2+",
"display": "2+",
"system": "dnpm-dip/mtb/ihc/protein-expression/result"
},
"tpsScore": 65,
"icScore": {
"code": "3",
"display": ">= 10%",
"system": "dnpm-dip/mtb/ihc/protein-expression/ic-score"
},
"tcScore": {
"code": "1",
"display": ">= 1%",
"system": "dnpm-dip/mtb/ihc/protein-expression/tc-score"
}
}
],
"msiMmr": []
}
}
],
"msiFindings": [
{
"id": "883760c5-4d9e-49c7-8ccb-c6bd1c78a707",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"specimen": {
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"type": "TumorSpecimen"
},
"method": {
"code": "IHC",
"display": "IHC",
"system": "dnpm-dip/mtb/msi/method"
},
"value": 1.9036174264610368,
"interpretation": {
"code": "msi-low",
"display": "MSI low",
"system": "dnpm-dip/mtb/msi/interpretation"
}
}
],
"ngsReports": [
{
"id": "47657955-ba62-49c5-a11f-d00a05b96b61",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"specimen": {
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"type": "TumorSpecimen"
},
"issuedOn": "2025-08-19",
"type": {
"code": "panel",
"display": "Panel",
"system": "dnpm-dip/ngs/type"
},
"metadata": [
{
"kitType": "Kit Type",
"kitManufacturer": "Manufacturer",
"sequencer": "Sequencer",
"referenceGenome": "HG19",
"pipeline": "https://github.com/pipeline-project"
}
],
"results": {
"tumorCellContent": {
"id": "2735fb65-1c40-4ece-83dd-23c75a0bc27d",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"specimen": {
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"type": "TumorSpecimen"
},
"method": {
"code": "bioinformatic",
"display": "Bioinformatisch",
"system": "dnpm-dip/mtb/tumor-cell-content/method"
},
"value": 0.5928897004804358
},
"tmb": {
"id": "9987b47d-0adb-4fe1-8102-87beb6e6ac76",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"specimen": {
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"type": "TumorSpecimen"
},
"value": {
"value": 221755,
"unit": "Mutations per megabase"
},
"interpretation": {
"code": "low",
"display": "Niedrig",
"system": "dnpm-dip/mtb/ngs/tmb/interpretation"
}
},
"brcaness": {
"id": "d4dc4910-8ce0-4d40-97f8-a23c85f5bb94",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"specimen": {
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"type": "TumorSpecimen"
},
"value": 0.5,
"confidenceRange": {
"min": 0.4,
"max": 0.6
}
},
"hrdScore": {
"id": "dd61fc6b-69ab-4177-9c45-1388fd44cc26",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"specimen": {
"id": "f9c2810b-19e7-4236-98bd-a8687be994e3",
"type": "TumorSpecimen"
},
"value": 0.3013567222917729,
"components": {
"lst": 0.6540355443970775,
"loh": 0.5120091016471767,
"tai": 0.4348435101837189
},
"interpretation": {
"code": "high",
"display": "Hoch",
"system": "dnpm-dip/mtb/ngs/hrd-score/interpretation"
}
},
"simpleVariants": [
{
"id": "7f99bbc8-2a68-4fe6-a53b-eba80bf7c0a2",
"patient": {
"id": "d0c95174-b9ab-4c6c-8fda-d8176df6f216",
"type": "Patient"
},
"externalIds": [
{
"value": "2725b21f-99be-48e2-baea-034b2631dbbe",
"system": "https://www.ncbi.nlm.nih.gov/snp"
},
{
"value": "914a4b13-15f2-4558-8e41-c1896f7e2fd1",
"system": "https://cancer.sanger.ac.uk/cosmic"
}
],
"chromosome": "chr12",
"gene": {
"code": "HGNC:1097",
"display": "BRAF",
"system": "https://www.genenames.org/"
},
"localization": [
{
"code": "intronic",
"display": "Intronic",
"system": "dnpm-dip/variant/localization"
}
],
"transcriptId": {
"value": "f8b0b7f6-4be6-41bd-8e48-8b24ecbf1bdd",
"system": "https://www.ensembl.org"
},
"exonId": "9",
"position": {
"start": 136
},
"altAllele": "A",
"refAllele": "T",
"dnaChange": "c.136T>A",
"proteinChange": "p.Lys23_Val25del",
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