mirror of
https://github.com/pcvolkmer/onkostar-plugin-dnpm.git
synced 2025-07-02 09:12:54 +00:00
307 lines
12 KiB
Java
307 lines
12 KiB
Java
package DNPM;
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import ATCCodes.AtcCode;
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import com.fasterxml.jackson.core.JsonProcessingException;
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import com.fasterxml.jackson.databind.ObjectMapper;
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import de.itc.onkostar.api.Disease;
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import de.itc.onkostar.api.IOnkostarApi;
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import de.itc.onkostar.api.Item;
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import de.itc.onkostar.api.Procedure;
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import de.itc.onkostar.api.analysis.AnalyzerRequirement;
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import de.itc.onkostar.api.analysis.IProcedureAnalyzer;
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import de.itc.onkostar.api.analysis.OnkostarPluginType;
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import org.hibernate.SQLQuery;
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import org.hibernate.Session;
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import org.hibernate.SessionFactory;
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import org.hibernate.transform.Transformers;
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import org.hibernate.type.StandardBasicTypes;
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import org.slf4j.Logger;
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import org.slf4j.LoggerFactory;
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import java.util.*;
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public class DNPMHelper implements IProcedureAnalyzer {
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private static final Logger logger = LoggerFactory.getLogger(DNPMHelper.class);
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private final IOnkostarApi onkostarApi;
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public DNPMHelper(final IOnkostarApi onkostarApi) {
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this.onkostarApi = onkostarApi;
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}
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@Override
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public OnkostarPluginType getType() {
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// Typ des Plugins
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// Für das Interface IProcedureAnalyzer gültig sind ANALYZER und BACKEND_SERVICE
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return OnkostarPluginType.BACKEND_SERVICE;
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}
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@Override
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public String getVersion() {
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return "1";
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}
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@Override
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public String getName() {
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return "UMR DNPM";
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}
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@Override
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public String getDescription() {
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return "Methoden für DNPM-Formulare";
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}
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@Override
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public boolean isRelevantForDeletedProcedure() {
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return false;
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}
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@Override
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public boolean isSynchronous() {
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return true;
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}
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@Override
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public AnalyzerRequirement getRequirement() {
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return AnalyzerRequirement.PROCEDURE;
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}
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@Override
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public boolean isRelevantForAnalyzer(Procedure entry, Disease currentDisease) {
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// Plugin enthält nur Methoden für Formulare und soll nicht ausgeführt werden
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return false;
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}
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@Override
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public void analyze(Procedure entry, Disease currentDisease) {
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// wird nicht benötigt, da dass Plugin nicht ausgeführt wird
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}
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@SuppressWarnings("unchecked")
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public Object getVerweise(final Map<String, Object> input) {
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int ProcedureId = (int) input.get("ProcedureId");
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int PatientId = (int) input.get("PatientId");
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int value = 0;
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List<Map<String, String>> VerbundeneFormulare = new ArrayList<Map<String, String>>();
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try {
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SessionFactory sessionFactory = onkostarApi.getSessionFactory();
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Session session = sessionFactory.getCurrentSession();
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try {
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String sql = "SELECT prozedur.id AS procedure_id, prozedur.data_form_id, data_catalogue.name AS data_catalogue, data_catalogue_entry.name AS data_catalogue_entry, data_form.description AS formname, prozedur.beginndatum AS datum " +
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"FROM prozedur " +
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"LEFT JOIN data_form_data_catalogue ON data_form_data_catalogue.data_form_id = prozedur.data_form_id " +
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"LEFT JOIN data_catalogue_entry ON data_catalogue_entry.data_catalogue_id = data_form_data_catalogue.data_catalogue_id " +
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"LEFT JOIN data_catalogue ON data_catalogue.id = data_catalogue_entry.data_catalogue_id " +
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"LEFT JOIN data_form ON data_form.id = prozedur.data_form_id " +
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"WHERE patient_id = " + PatientId + " " +
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"AND geloescht = 0 " +
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"AND data_catalogue_entry.type = 'formReference' " +
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"GROUP BY prozedur.id, prozedur.data_form_id, data_catalogue.name, data_catalogue_entry.name";
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SQLQuery query = session.createSQLQuery(sql)
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.addScalar("procedure_id", StandardBasicTypes.INTEGER)
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.addScalar("data_form_id", StandardBasicTypes.INTEGER)
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.addScalar("data_catalogue", StandardBasicTypes.STRING)
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.addScalar("data_catalogue_entry", StandardBasicTypes.STRING)
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.addScalar("formname", StandardBasicTypes.STRING)
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.addScalar("datum", StandardBasicTypes.DATE);
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query.setResultTransformer(Transformers.aliasToBean(VerweisVon.class));
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List<VerweisVon> result = query.list();
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try {
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for (VerweisVon var : result) {
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sql = var.getSQL();
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query = session.createSQLQuery(sql)
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.addScalar("value", StandardBasicTypes.INTEGER);
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if (query.uniqueResult() != null) {
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value = (Integer) query.uniqueResult();
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}
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if (value == ProcedureId) {
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VerbundeneFormulare.add(Map.of("formular", var.getVerbundenesFormular()));
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value = 0;
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}
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}
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} catch (Exception e) {
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// TODO Auto-generated catch block
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e.printStackTrace();
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}
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} catch (Exception e) {
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return null;
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}
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} catch (Exception e) {
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return null;
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}
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return VerbundeneFormulare;
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}
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public List<Map<String, String>> getSystemischeTherapienFromDiagnose(final Map<String, Object> input) {
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var diagnoseId = input.get("DiagnoseId");
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if (null == diagnoseId || Integer.parseInt(diagnoseId.toString()) == 0) {
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logger.error("Kein Parameter 'DiagnoseId' angegeben, gebe 'null' zurück");
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return null;
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}
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List<Map<String, String>> result = new ArrayList<>();
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for (Procedure Prozedur : onkostarApi.getProceduresForDiseaseByForm(Integer.parseInt(diagnoseId.toString()), "OS.Systemische Therapie")) {
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result.add(getProzedurwerte(Prozedur));
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}
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return result;
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}
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private static Map<String, String> getProzedurwerte(Procedure Prozedur) {
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List<String> wirkstoffListe = new ArrayList<>();
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// SubstanzenCodesListe enthält die Liste der SubstanzenCodes
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List<Map<String, String>> substanzenCodesListe = new ArrayList<>();
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// alle Werte der Prozedur auslesen
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Map<String, Item> alleWerte = Prozedur.getAllValues();
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// Prozedurwerte enthält nur die interessanten Werte
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Map<String, String> prozedurwerte = new HashMap<>();
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// alle Werte durchgehen und die interessanten übernehmen
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if (alleWerte.containsKey("Beendigung")) {
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prozedurwerte.put("Beendigung", alleWerte.get("Beendigung").getValue());
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}
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if (alleWerte.containsKey("Ergebnis")) {
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prozedurwerte.put("Ergebnis", alleWerte.get("Ergebnis").getValue());
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}
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if (alleWerte.containsKey("Beginn")) {
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prozedurwerte.put("Beginn", alleWerte.get("Beginn").getString());
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}
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if (alleWerte.containsKey("Ende")) {
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prozedurwerte.put("Ende", alleWerte.get("Ende").getString());
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}
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if (alleWerte.containsKey("SubstanzenList")) {
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List<Map<String, String>> substanzList = alleWerte.get("SubstanzenList").getValue();
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for (var substanz : substanzList) {
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var substanzCodes = getSubstanzCode(substanz);
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substanzenCodesListe.add(substanzCodes);
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wirkstoffListe.add(substanzCodes.get("substance"));
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}
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}
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prozedurwerte.put("Wirkstoffe", String.join(", ", wirkstoffListe));
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try {
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ObjectMapper mapper = new ObjectMapper();
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prozedurwerte.put("WirkstoffCodes", mapper.writeValueAsString(substanzenCodesListe));
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} catch (JsonProcessingException e) {
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logger.error("Kann 'WirkstoffCodes' nicht in JSON-String mappen", e);
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}
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return prozedurwerte;
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}
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private static Map<String, String> getSubstanzCode(Map<String, String> substanz) {
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Map<String, String> substanzCode = new HashMap<>();
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if (substanz.containsKey("Substanz")) {
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if (AtcCode.isAtcCode(substanz.get("Substanz"))) {
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substanzCode.put("system", "ATC");
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} else {
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substanzCode.put("system", "other");
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}
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substanzCode.put("code", substanz.get("Substanz"));
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}
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if (substanz.containsKey("Substanz_shortDescription")) {
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substanzCode.put("substance", substanz.get("Substanz_shortDescription"));
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}
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return substanzCode;
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}
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public Object getProzedurenFromDiagnose(final Map<String, Object> input) {
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String dataForm = (String) input.get("dataForm");
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int DiagnoseId = (int) input.get("DiagnoseId");
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int PatientId = (int) input.get("PatientId");
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// Prozedur, Feldname, Wert
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List<Object> Formulare = new ArrayList<Object>();
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String jsonStr = "";
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List<Procedure> Prozeduren = onkostarApi.getProceduresByPatientId(PatientId);
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for (Procedure Prozedur : Prozeduren) {
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// Formular gehört zur aktuellen Diagnose und hat den angegebenen Namen
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if (Prozedur.getDiseaseIds().contains(DiagnoseId) && Prozedur.getFormName().contains(dataForm)) {
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// alle Werte auslesen
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Map<String, Item> Werte = Prozedur.getAllValues();
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Map<String, Object> Values = new HashMap<>();
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for (Map.Entry<String, Item> WerteListe : Werte.entrySet()) {
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Values.put(WerteListe.getKey(), WerteListe.getValue());
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// System.out.println(WerteListe.getKey() + ": " + WerteListe.getValue());
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}
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Map<String, Object> Formular = new HashMap<>();
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Formular.put("Formular", Prozedur.getFormName());
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Formular.put("Felder", Values);
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Formulare.add(Formular);
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}
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}
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ObjectMapper Obj = new ObjectMapper();
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try {
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jsonStr = Obj.writeValueAsString(Formulare);
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} catch (JsonProcessingException e) {
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// TODO Auto-generated catch block
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e.printStackTrace();
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}
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return jsonStr;
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}
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public Object getEmpfehlung(final Map<String, Object> input) {
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// Auslesen der Parameter aus 'input'
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int ProcedureID = (int) input.get("ProcedureID");
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String sql;
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try {
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SessionFactory sessionFactory = onkostarApi.getSessionFactory();
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Session session = sessionFactory.getCurrentSession();
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try {
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sql = "SELECT * FROM prozedur "
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+ "LEFT JOIN dk_mtb_einzelempfehlung em ON em.id = prozedur.id "
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+ "WHERE prozedur.hauptprozedur_id = " + ProcedureID + " AND prozedur.geloescht = 0 AND prozedur.data_form_id = 489 "
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+ "ORDER BY beginndatum";
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SQLQuery query = session.createSQLQuery(sql)
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.addScalar("id", StandardBasicTypes.STRING)
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.addScalar("genname", StandardBasicTypes.STRING)
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.addScalar("geneid", StandardBasicTypes.STRING)
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.addScalar("geneidlink", StandardBasicTypes.STRING)
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.addScalar("empfehlung", StandardBasicTypes.STRING)
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.addScalar("beginndatum", StandardBasicTypes.STRING);
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@SuppressWarnings("unchecked")
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List<String[]> rows = query.list();
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return rows;
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} catch (Exception e) {
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return null;
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}
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} catch (Exception e) {
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return null;
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}
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}
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public Object updateEmpfehlungPrio(final Map<String, Object> input) {
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// Auslesen der Parameter aus 'input'
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//int rid = (int) input.get("rid");
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Object rid = input.get("rid");
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Object strDate = input.get("bd");
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SQLQuery result = null;
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//String strD = strDate.toString();
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//String CompareDate = strD.substring(1, 11);
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//DateFormat simpleDateFormat=new SimpleDateFormat("yyyy-MM-dd");
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String sql;
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try {
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sql = "UPDATE prozedur SET beginndatum = '" + strDate + "' WHERE id = '" + rid + "' ";
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result = onkostarApi.getSessionFactory().getCurrentSession().createSQLQuery(sql);
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result.executeUpdate();
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return true;
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} catch (Exception e) {
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return "Achtung: Ein Fehler ist aufgetreten, Änderung konnte nicht gespeichert werden!";
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//return null;
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}
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}
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} |