1
0
mirror of https://github.com/pcvolkmer/onkostar-plugin-dnpm.git synced 2025-07-02 01:02:55 +00:00

Issue #28: Tests zur Ermittlung von Varianten aus "OS.Molekulargenetik" hinzugefügt

This commit is contained in:
2023-05-09 09:20:27 +02:00
parent c45dc8f5df
commit de50c50eb4
2 changed files with 95 additions and 0 deletions

View File

@ -0,0 +1,46 @@
package DNPM.analyzer;
import DNPM.security.DelegatingDataBasedPermissionEvaluator;
import DNPM.services.molekulargenetik.MolekulargenetikFormService;
import de.itc.onkostar.api.IOnkostarApi;
import de.itc.onkostar.api.Procedure;
import org.junit.jupiter.api.BeforeEach;
import org.junit.jupiter.api.Test;
import org.junit.jupiter.api.extension.ExtendWith;
import org.mockito.Mock;
import org.mockito.junit.jupiter.MockitoExtension;
import java.util.Map;
import static org.mockito.ArgumentMatchers.any;
import static org.mockito.Mockito.*;
@ExtendWith(MockitoExtension.class)
class EinzelempfehlungAnalyzerTest {
private IOnkostarApi onkostarApi;
private MolekulargenetikFormService molekulargenetikFormService;
private EinzelempfehlungAnalyzer analyzer;
@BeforeEach
void setup(
@Mock IOnkostarApi onkostarApi,
@Mock MolekulargenetikFormService molekulargenetikFormService,
@Mock DelegatingDataBasedPermissionEvaluator permissionEvaluator
) {
this.onkostarApi = onkostarApi;
this.molekulargenetikFormService = molekulargenetikFormService;
this.analyzer = new EinzelempfehlungAnalyzer(onkostarApi, molekulargenetikFormService, permissionEvaluator);
}
@Test
void testShouldRequestVariantsFromMolekulargenetikFormService() {
doAnswer(invocationOnMock -> new Procedure(this.onkostarApi)).when(onkostarApi).getProcedure(anyInt());
analyzer.getVariants(Map.of("id", 123));
verify(molekulargenetikFormService, times(1)).getVariants(any(Procedure.class));
}
}

View File

@ -0,0 +1,49 @@
package DNPM.services.molekulargenetik;
import de.itc.onkostar.api.Item;
import de.itc.onkostar.api.Procedure;
import org.junit.jupiter.api.BeforeEach;
import org.junit.jupiter.api.Test;
import static org.assertj.core.api.Assertions.assertThat;
public class OsMolekluargenetikFormServiceTest {
private OsMolekulargenetikFormService service;
@BeforeEach
void setup() {
this.service = new OsMolekulargenetikFormService();
}
@Test
void testShouldReturnVariants() {
var procedure = new Procedure(null);
procedure.setId(123);
procedure.setFormName("OS.Molekulargenetik");
var subProcedure1 = new Procedure(null);
subProcedure1.setId(1123);
subProcedure1.setFormName("OS.Molekulargenetische Untersuchung");
subProcedure1.setValue("Ergebnis", new Item("Ergebnis", "P"));
subProcedure1.setValue("Untersucht", new Item("Untersucht", "BRAF"));
subProcedure1.setValue("ExonInt", new Item("ExonInt", 123));
subProcedure1.setValue("Pathogenitaetsklasse", new Item("Pathogenitaetsklasse", "2"));
procedure.addSubProcedure("MolekulargenetischeUntersuchung", subProcedure1);
var subProcedure2 = new Procedure(null);
subProcedure2.setId(2123);
subProcedure2.setFormName("OS.Molekulargenetische Untersuchung");
subProcedure2.setValue("Ergebnis", new Item("Ergebnis", "CNV"));
subProcedure2.setValue("Untersucht", new Item("Untersucht", "BRAF"));
subProcedure2.setValue("ExonInt", new Item("ExonInt", 123));
subProcedure2.setValue("Pathogenitaetsklasse", new Item("Pathogenitaetsklasse", "2"));
procedure.addSubProcedure("MolekulargenetischeUntersuchung", subProcedure2);
var actual = service.getVariants(procedure);
assertThat(actual).hasSize(2);
}
}