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mirror of https://github.com/pcvolkmer/etl-processor.git synced 2025-04-20 01:36:50 +00:00

154 Commits

Author SHA1 Message Date
fad2f33fd6 refactor: use event listener to listen for page load event 2024-01-10 09:22:51 +01:00
d88e2973da feat: add paginator to request page 2024-01-10 09:12:02 +01:00
af767e4ea6 chore: update images 2024-01-10 07:44:10 +01:00
f98c970348 chore: layout and style changes 2024-01-09 18:09:44 +01:00
75872a149f docs: add some more information within README.doc 2024-01-05 11:53:51 +01:00
e24ba430a5 feat #20: add server forward headers config
closes #20
2024-01-05 11:43:58 +01:00
08914a6f86 docs: link simple docker-compose.yml example within README.md 2024-01-04 13:29:49 +01:00
104f50afcb docs: add docker-compose.yml example 2024-01-04 13:14:10 +01:00
0083e75940
Merge pull request #19 from CCC-MF/feat_17
feat #17: add request retry
2024-01-04 11:56:40 +01:00
c892ff2461 test #17: add tests for retry 2024-01-04 11:50:39 +01:00
4a9cffbaa5 feat #17: initial support for request retry 2024-01-04 07:33:03 +01:00
8a6f9a6e02 build: bump version v0.4.0 2024-01-03 13:25:21 +01:00
91f17f6af5 chore: update mockito-kotlin test dependency 2024-01-03 12:27:26 +01:00
8d4497bf2c build: update kotlin version 2024-01-03 12:25:41 +01:00
4ab20a5f16 fix: add rest uri config to integration tests 2024-01-02 07:22:17 +01:00
167587a473
Merge pull request #16 from CCC-MF/feat_15
feat #15: add connection checks to bwHC backend
2024-01-02 06:53:49 +01:00
e5d80f89b0 feat #15: add connection checks to bwHC backend 2024-01-02 06:51:01 +01:00
5d0e815037 build: bump version v0.3.1 2023-12-29 17:27:21 +01:00
a5a19e0cea chore: update hapi-fhir dependency to 6.10.2
This mitigates CVE-2023-6378, CVE-2023-2976 and CVE-2020-8908
2023-12-29 17:27:17 +01:00
1493a63e02 chore: remove snakeyaml dependency version override
Spring Boot 3.2.1 uses newer version 2.2, so there is no need to
override dependency version.
2023-12-29 17:27:10 +01:00
fe927e65aa chore: remove explicit kafka dependency version
Spring Boot 3.6.1 uses Kafka 3.6.1 that mitigates
CVE-2023-34453, CVE-2023-34454, CVE-2023-34455, CVE-2023-43642
and new CVE-2023-44981 from version 3.6.0
2023-12-29 17:26:51 +01:00
add09c3f9c chore: update spring boot to version 3.2.1 2023-12-29 17:06:47 +01:00
5eb969c36a Bump version v0.3.0 2023-12-15 11:46:50 +01:00
3cc4f8c1a4 test: add tests to ensure patient id pseudonym
This uses fake MTBFile JSON as described here:
https://ibmi-intra.cs.uni-tuebingen.de/display/ZPM/bwHC+REST+API
2023-12-14 12:56:36 +01:00
Niklas
707bc55ab6
fix: Replace the patient's id in more places (#14)
This adds studyInclusionRequests and tumorMorphology.
2023-12-14 12:55:09 +01:00
d7949a7dce test: expect sorted data quality report issues 2023-12-05 14:34:51 +01:00
f5999ff325 test: expect 3 issues with different severity 2023-12-05 14:31:43 +01:00
a62da60809 feat: sort data quality report items by severity 2023-12-05 14:24:53 +01:00
ced6609d9a fix: add info severity to data quality report 2023-12-05 14:24:40 +01:00
8dee349c37 build: update to Spring Boot 3.2.0 2023-12-04 18:18:31 +01:00
3e45de56cf feat: add page that shows transformation configuration v0.2.0 2023-12-04 17:35:44 +01:00
7f54efe034 docs: remove notice on how to setup kafka 2023-12-04 16:11:33 +01:00
effcdd811f style: add colored table rows for requests 2023-12-04 16:11:02 +01:00
acf49a892e chore: update Kotlin and dependency management plugin 2023-12-04 14:37:58 +01:00
284806d130 chore: update Spring Boot to version 3.1.6 2023-11-25 14:36:53 +01:00
cf2d338e13 test: add integration test for mtb file transformation 2023-11-25 14:33:02 +01:00
d5552b3ca4 chore: Update Kotlin version to 1.9.20 2023-11-21 08:31:18 +01:00
892c0dea8f chore: Update Apache Kafka client library to version 3.6.0 2023-10-20 13:50:07 +02:00
0305e69e9e chore: Update Spring Boot to version 3.1.5 2023-10-20 13:49:38 +02:00
1a913b2644 Issue #12: Remove obsolete braces from transformation examples 2023-10-05 12:44:09 +02:00
0eee1908df
Merge pull request #13 from CCC-MF/issue_12
Transformation of MTBFile data based on rules
2023-10-05 12:41:49 +02:00
ffea9343c8 Issue #12: Change README.md to show transformation config names as env var 2023-10-05 12:36:37 +02:00
eb24995ed9 Issue #12: Log transformation count applied on application start 2023-10-05 12:35:29 +02:00
4196664060 Issue #12: Transform MTBFile objects by using transformation rules 2023-10-05 12:09:56 +02:00
2824951e5e Issue #12: Add information about transformation rules in README.md 2023-10-05 11:45:42 +02:00
1e1db1c4d9 Issue #12: Add application config for transformation configuration 2023-10-05 11:37:10 +02:00
7440fe1e23 Issue #12: Basic implementation of transformation service 2023-10-05 10:51:49 +02:00
3f5c5e28fa chore: update Spring Boot dependencies 2023-09-26 09:27:21 +02:00
6397b2a019 chore: pump version to dev version snapshot 2023-09-26 09:27:21 +02:00
jlidke
bf8f87b261
fix: removed gaps system from GPAS pseudonym value. Also added clean up method, which will replace filename invalid characters witch '_'. (#11) 2023-09-04 15:41:22 +02:00