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mirror of https://github.com/pcvolkmer/mv64e-onkostar-data.git synced 2025-07-02 02:22:54 +00:00

feat: add MTB episodes of care

This commit is contained in:
2025-06-28 14:28:33 +02:00
parent 4841aae3e7
commit 1e09495d41
4 changed files with 135 additions and 1 deletions

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@ -25,7 +25,7 @@ var jsonResult = Converter.toJsonString(mtbMapper.getByCaseId("16000123"));
| DNPM-Datenmodell 2.1 - Bereich | Status | Anmerkung |
|----------------------------------|--------|----------------------------------------------------------------|
| Patient | ✅ | Verwendet Datenbank-ID, keine managing Site |
| Episoden | | |
| Episoden | | |
| Diagnosen | ✅ | Entsprechend Formularaufbau nur Diagnose der aktuellen Episode |
| Verwandten-Diagnosen | ✅ | |
| Systemische Leitlinien-Therapien | ⌛ | Status noch nicht vollständig in Formular |

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@ -67,6 +67,7 @@ public class MtbDataMapper implements DataMapper<Mtb> {
catalogueFactory.catalogue(TumorgradingCatalogue.class),
propertyCatalogue
);
var mtbEpisodeDataMapper = new MtbEpisodeDataMapper(kpaCatalogue, propertyCatalogue);
var prozedurMapper = new KpaProzedurDataMapper(
catalogueFactory.catalogue(ProzedurCatalogue.class),
propertyCatalogue
@ -97,6 +98,7 @@ public class MtbDataMapper implements DataMapper<Mtb> {
resultBuilder
.patient(kpaPatient)
.episodesOfCare(List.of(mtbEpisodeDataMapper.getById(kpaId)))
// DNPM Klinik/Anamnese
.diagnoses(List.of(diagnosisDataMapper.getById(kpaId)))
.guidelineProcedures(prozedurMapper.getByParentId(kpaId))

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@ -0,0 +1,61 @@
package dev.pcvolkmer.onco.datamapper.mapper;
import dev.pcvolkmer.mv64e.mtb.MtbEpisodeOfCare;
import dev.pcvolkmer.mv64e.mtb.PeriodDate;
import dev.pcvolkmer.mv64e.mtb.Reference;
import dev.pcvolkmer.onco.datamapper.PropertyCatalogue;
import dev.pcvolkmer.onco.datamapper.datacatalogues.KpaCatalogue;
import java.util.List;
import static dev.pcvolkmer.onco.datamapper.mapper.MapperUtils.getPatientReference;
/**
* Mapper class to load and map patient data from database table 'dk_dnpm_kpa'
*
* @author Paul-Christian Volkmer
* @since 0.1
*/
public class MtbEpisodeDataMapper implements DataMapper<MtbEpisodeOfCare> {
private final KpaCatalogue kpaCatalogue;
private final PropertyCatalogue propertyCatalogue;
public MtbEpisodeDataMapper(
final KpaCatalogue kpaCatalogue,
final PropertyCatalogue propertyCatalogue
) {
this.kpaCatalogue = kpaCatalogue;
this.propertyCatalogue = propertyCatalogue;
}
/**
* Loads and maps a ca plan using the database id
*
* @param id The database id of the procedure data set
* @return The loaded Patient data
*/
@Override
public MtbEpisodeOfCare getById(int id) {
var kpaData = kpaCatalogue.getById(id);
var builder = MtbEpisodeOfCare.builder();
builder
.id(kpaData.getString("id"))
.patient(getPatientReference(kpaData.getString("patient_id")))
.diagnoses(
List.of(
Reference.builder()
.id(kpaData.getString("id"))
.type("Diagnose")
.build()
)
)
.period(PeriodDate.builder().start(kpaData.getDate("anmeldedatummtb")).build())
.build()
;
return builder.build();
}
}

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@ -0,0 +1,71 @@
package dev.pcvolkmer.onco.datamapper.mapper;
import dev.pcvolkmer.mv64e.mtb.MtbEpisodeOfCare;
import dev.pcvolkmer.mv64e.mtb.PeriodDate;
import dev.pcvolkmer.mv64e.mtb.Reference;
import dev.pcvolkmer.onco.datamapper.PropertyCatalogue;
import dev.pcvolkmer.onco.datamapper.ResultSet;
import dev.pcvolkmer.onco.datamapper.datacatalogues.KpaCatalogue;
import org.junit.jupiter.api.BeforeEach;
import org.junit.jupiter.api.Test;
import org.junit.jupiter.api.extension.ExtendWith;
import org.mockito.Mock;
import org.mockito.junit.jupiter.MockitoExtension;
import java.time.Instant;
import java.util.Date;
import java.util.Map;
import static org.assertj.core.api.Assertions.assertThat;
import static org.mockito.ArgumentMatchers.anyInt;
import static org.mockito.Mockito.doAnswer;
@ExtendWith(MockitoExtension.class)
class MtbEpisodeDataMapperTest {
KpaCatalogue kpaCatalogue;
PropertyCatalogue propertyCatalogue;
MtbEpisodeDataMapper dataMapper;
@BeforeEach
void setUp(
@Mock KpaCatalogue kpaCatalogue,
@Mock PropertyCatalogue propertyCatalogue
) {
this.kpaCatalogue = kpaCatalogue;
this.propertyCatalogue = propertyCatalogue;
this.dataMapper = new MtbEpisodeDataMapper(kpaCatalogue, propertyCatalogue);
}
@Test
void shouldMapData() {
final Map<String, Object> kpaData = Map.of(
"id", 4711,
"patient_id", 42,
"anmeldedatummtb", new java.sql.Date(Date.from(Instant.parse("2025-06-28T12:00:00Z")).getTime())
);
doAnswer(invocationOnMock -> ResultSet.from(kpaData))
.when(kpaCatalogue)
.getById(anyInt());
var actual = this.dataMapper.getById(1);
assertThat(actual).isInstanceOf(MtbEpisodeOfCare.class);
assertThat(actual.getId()).isEqualTo("4711");
assertThat(actual.getPatient())
.isEqualTo(Reference.builder().id("42").type("Patient").build());
assertThat(actual.getDiagnoses())
.hasSize(1);
assertThat(actual.getDiagnoses().get(0))
.isEqualTo(Reference.builder().id("4711").type("Diagnose").build());
assertThat(actual.getPeriod())
.isEqualTo(
// UTC day start!
PeriodDate.builder().start(Date.from(Instant.parse("2025-06-28T00:00:00Z"))).build()
);
}
}